CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSLACG00000001487
(
Latimeria chalumnae
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSLACG00000001487
T210763_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HESX1
M03187_2.00
Homo sapiens
NHTAATTRVH
DBYAATTADN
SELEX
Jolma et al.(2013)
HESX1_1
0.699
0.304
HESX1
M03188_2.00
Homo sapiens
NTAATTRGYAATTAD
HTAATTRCYAATTAN
SELEX
Jolma et al.(2013)
HESX1_2
0.699
0.304
HESX1
M05227_2.00
Homo sapiens
DYAATTRV
BYAATTRH
SELEX
Yin et al.(2017)
HESX1_FL_HT-SELEX
0.699
0.304
HESX1
M05228_2.00
Homo sapiens
NYAATTRD
HYAATTRN
SELEX
Yin et al.(2017)
HESX1_FL_Methyl-HT-SELEX
0.699
0.304
NOBOX
M09135_2.00
Homo sapiens
HTAATTRVB
VBYAATTAD
Misc
Kulakovskiy et al.(2013)
NOBOX_HUMAN.H11MO.0.C
0.656
0.413
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLACP00000001663
Homeodomain
174
195
KKTRTVFSRSQVFQLESTFDLH
ENSLACP00000001663
Homeodomain
191
214
TFDLHLTETQVKIWFQNRRNKWKR
Links
Other
Homeodomain
family TFs
Other
Latimeria chalumnae
TFs
124 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACUA026833
Anopheles culicifacies
ACUA026833
I
0.825
AMAM000848
Anopheles maculatus
AMAM000848
I
0.825
HPLM_0001894101
Haemonchus placei
HPLM_0001894101
I
0.760
tetur14g02510
Tetranychus urticae
tetur14g02510
I
0.752
ENSFCAG00000029037
Felis catus
ENSFCAG00000029037
I
0.751
EVEC_0000357701
Enterobius vermicularis
EVEC_0000357701
I
0.743
CGI_10009720
Crassostrea gigas
CGI_10009720
I
0.739
tetur02g13510
Tetranychus urticae
tetur02g13510
I
0.730
ENSPSIG00000014030
Pelodiscus sinensis
ENSPSIG00000014030
I
0.726
ENSTSYG00000014450
Tarsius syrichta
ENSTSYG00000014450
I
0.720
LDEC008146
Leptinotarsa decemlineata
LDEC008146
I
0.717
Gfo_R002825
Geospiza fortis
Gfo_R002825
I
0.715
Ogr03859
Ophisaurus gracilis
Ogr03859
I
0.715
ENSAMEG00000004942
Ailuropoda melanoleuca
ENSAMEG00000004942
I
0.713
BGLB013824
Biomphalaria glabrata
BGLB013824
I
0.710
OESDEN_01216
Oesophagostomum dentatum
OESDEN_01216
I
0.706
HESX1
Homo sapiens
ENSG00000163666
D
0.699
HPBE_0000873701
Heligmosomoides bakeri
HPBE_0000873701
I
0.699
ENSP00000360811-D1
Bos grunniens
ENSP00000360811-D1
I
0.691
PRRX2
Cavia porcellus
ENSCPOG00000021821
I
0.690
meox1
Takifugu rubripes
ENSTRUG00000005193
I
0.687
ENSCSAVG00000000940
Ciona savignyi
ENSCSAVG00000000940
I
0.684
SROB_0001564301
Schistosoma rodhaini
SROB_0001564301
I
0.684
MCINX007054
Melitaea cinxia
MCINX007054
I
0.680
MCINX008871
Melitaea cinxia
MCINX008871
I
0.680
NBR_0000705501
Nippostrongylus brasiliensis
NBR_0000705501
I
0.680
Aan_R011917
Calypte anna
Aan_R011917
I
0.679
PEQ_0001388201
Parascaris equorum
PEQ_0001388201
I
0.679
Cmyd_10001740
Chelonia mydas
Cmyd_10001740
I
0.678
TCNE_0001081001
Toxocara canis
TCNE_0001081001
I
0.678
CGI_10016653
Crassostrea gigas
CGI_10016653
I
0.676
TCNE_0000653501
Toxocara canis
TCNE_0000653501
I
0.675
L798_06393
Zootermopsis nevadensis
L798_06393
I
0.674
CLEC007171
Cimex lectularius
CLEC007171
I
0.674
ALUE_0001497801
Ascaris lumbricoides
ALUE_0001497801
I
0.674
YQE_10100
Dendroctonus ponderosae
YQE_10100
I
0.671
ALUE_0000848601
Ascaris lumbricoides
ALUE_0000848601
I
0.671
DLX3
Bos taurus
ENSBTAG00000017409
I
0.670
NOBOX
Oryctolagus cuniculus
ENSOCUG00000001027
I
0.670
TELCIR_07728
Teladorsagia circumcincta
TELCIR_07728
I
0.669
LHX6
Gorilla gorilla
ENSGGOG00000008310
I
0.668
scaffold251-EXSNAP2012.22
Pristionchus exspectatus
scaffold251-EXSNAP2012.22
I
0.666
DLX4
Bos taurus
ENSBTAG00000007353
I
0.665
ENSOARG00000005572
Ovis aries
ENSOARG00000005572
I
0.665
ENSBTAP00000009672-D1
Bos grunniens
ENSBTAP00000009672-D1
I
0.665
HPLM_0000971301
Haemonchus placei
HPLM_0000971301
I
0.661
TC000483
Tribolium castaneum
TC000483
I
0.658
NOBOX
Homo sapiens
ENSG00000106410
D
0.656
NOBOX
Pan troglodytes
ENSPTRG00000019828
I
0.656
nLs.2.1.2.g05836
Litomosoides sigmodontis
nLs.2.1.2.g05836
I
0.656
DLX4
Oryctolagus cuniculus
ENSOCUG00000022067
I
0.655
GF12207
Drosophila ananassae
FBgn0089246
I
0.655
TTAC_0001021101
Hydatigera taeniaeformis
TTAC_0001021101
N
0.654
ENSACAG00000002147
Anolis carolinensis
ENSACAG00000002147
I
0.653
NOBOX
Callithrix jacchus
ENSCJAG00000009917
I
0.653
ENSCSAG00000007090
Chlorocebus sabaeus
ENSCSAG00000007090
I
0.653
NOBOX
Equus caballus
ENSECAG00000003123
I
0.653
NOBOX
Felis catus
ENSFCAG00000004352
I
0.653
NOBOX
Gorilla gorilla
ENSGGOG00000022185
I
0.653
NOBOX
Myotis lucifugus
ENSMLUG00000004209
I
0.653
NOBOX
Macaca mulatta
ENSMMUG00000020609
I
0.653
ENSMPUG00000007079
Mustela putorius furo
ENSMPUG00000007079
I
0.653
ENSNLEG00000003406
Nomascus leucogenys
ENSNLEG00000003406
I
0.653
NOBOX
Otolemur garnettii
ENSOGAG00000010413
I
0.653
ENSPANG00000018829
Papio anubis
ENSPANG00000018829
I
0.653
ENSSTOG00000026570
Ictidomys tridecemlineatus
ENSSTOG00000026570
I
0.653
HMEL006244
Heliconius melpomene
HMEL006244
I
0.653
ENSMMUP00000027138
Macaca fascicularis
ENSMMUP00000027138
I
0.653
ENSP00000419457-D1
Bos grunniens
ENSP00000419457-D1
I
0.653
Myotis_brandtii_NOBOX_10026198
Myotis brandtii
Myotis_brandtii_NOBOX_10026198
I
0.653
Pvit_13361
Pogona vitticeps
Pvit_13361
I
0.653
SSLN_0001460801
Schistocephalus solidus
SSLN_0001460801
I
0.653
ENSMODG00000001675
Monodelphis domestica
ENSMODG00000001675
I
0.652
EFV57629
Trichinella spiralis
EFV57629
I
0.651
GF13343
Drosophila ananassae
FBgn0090375
I
0.651
D917_01051
Trichinella nativa
D917_01051
I
0.651
ADAC001468
Anopheles darlingi
ADAC001468
I
0.649
DLX4
Myotis lucifugus
ENSMLUG00000007268
I
0.649
HelroG173001
Helobdella robusta
HelroG173001
I
0.649
ACUA004306
Anopheles culicifacies
ACUA004306
I
0.649
MCOS_0000004601
Mesocestoides corti
MCOS_0000004601
I
0.649
SBAD_0000602401
Soboliphyme baturini
SBAD_0000602401
I
0.649
nRc.2.0.1.g35501
Romanomermis culicivorax
nRc.2.0.1.g35501
I
0.644
BGIBMGA003233
Bombyx mori
BGIBMGA003233
I
0.643
ENSTSYG00000000516
Tarsius syrichta
ENSTSYG00000000516
I
0.643
ASIM_0001230001
Anisakis simplex
ASIM_0001230001
I
0.643
ANCCAN_10593
Ancylostoma caninum
ANCCAN_10593
I
0.642
BGLB004491
Biomphalaria glabrata
BGLB004491
I
0.640
fgenesh2_pg.scaffold_23000163
Branchiostoma floridae
fgenesh2_pg.scaffold_23000163
I
0.639
L596_g8967
Steinernema carpocapsae
L596_g8967
I
0.639
SVUK_0001056001
Strongylus vulgaris
SVUK_0001056001
I
0.637
NOBOX
Canis familiaris
ENSCAFG00000003500
I
0.636
T265_14002
Opisthorchis viverrini
T265_14002
I
0.636
Ogr09065
Ophisaurus gracilis
Ogr09065
I
0.634
T265_02852
Opisthorchis viverrini
T265_02852
I
0.634
EFV55592
Trichinella spiralis
EFV55592
I
0.633
GK22877
Drosophila willistoni
FBgn0224839
I
0.633
Cflo_02794--XP_001120105.1_APIME
Camponotus floridanus
Cflo_02794--XP_001120105.1_APIME
I
0.633
L798_11440
Zootermopsis nevadensis
L798_11440
I
0.632
ENSMGAG00000013900
Meleagris gallopavo
ENSMGAG00000013900
I
0.630
SNAPOd2T00016706001
Oikopleura dioica
SNAPOd2T00016706001
I
0.626
ECANG7_01330
Echinococcus canadensis
ECANG7_01330
I
0.624
NECAME_16530
Necator americanus
NECAME_16530
I
0.622
DICVIV_02647
Dictyocaulus viviparus
DICVIV_02647
I
0.620
TTAC_0000027101
Hydatigera taeniaeformis
TTAC_0000027101
I
0.620
ADAC008104
Anopheles darlingi
ADAC008104
I
0.617
DBX1
Procavia capensis
ENSPCAG00000004905
N
0.617
L892_g24303
Steinernema scapterisci
L892_g24303
I
0.617
TTRE_0000072001
Trichuris trichiura
TTRE_0000072001
I
0.617
DBX1
Echinops telfairi
ENSETEG00000017576
N
0.616
HNAJ_0000529701
Hymenolepis nana
HNAJ_0000529701
N
0.616
Alligator_sinensis_CCG014496.1
Alligator sinensis
Alligator_sinensis_CCG014496.1
I
0.613
DICVIV_04104
Dictyocaulus viviparus
DICVIV_04104
N
0.610
PPAI007004
Phlebotomus papatasi
PPAI007004
I
0.609
nRc.2.0.1.g34428
Romanomermis culicivorax
nRc.2.0.1.g34428
I
0.609
Dbx1
Dipodomys ordii
ENSDORG00000009286
N
0.605
DBX1
Gorilla gorilla
ENSGGOG00000014848
N
0.605
ENSNLEG00000017811
Nomascus leucogenys
ENSNLEG00000017811
N
0.605
DBX1
Ochotona princeps
ENSOPRG00000012954
N
0.605
DBX1
Pan troglodytes
ENSPTRG00000003437
N
0.605
DBX1
Tursiops truncatus
ENSTTRG00000000318
N
0.605
lhx8b
Takifugu rubripes
ENSTRUG00000017607
I
0.604
SPU_004366
Strongylocentrotus purpuratus
SPU_004366
I
0.603
ENSPPYG00000003422
Pongo abelii
ENSPPYG00000003422
N
0.599