CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PEQ_0001388201
(
Parascaris equorum
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
PEQ_0001388201
T235699_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HESX1
M03187_2.00
Homo sapiens
NHTAATTRVH
DBYAATTADN
SELEX
Jolma et al.(2013)
HESX1_1
0.679
0.208
HESX1
M03188_2.00
Homo sapiens
NTAATTRGYAATTAD
HTAATTRCYAATTAN
SELEX
Jolma et al.(2013)
HESX1_2
0.679
0.208
HESX1
M05227_2.00
Homo sapiens
DYAATTRV
BYAATTRH
SELEX
Yin et al.(2017)
HESX1_FL_HT-SELEX
0.679
0.208
HESX1
M05228_2.00
Homo sapiens
NYAATTRD
HYAATTRN
SELEX
Yin et al.(2017)
HESX1_FL_Methyl-HT-SELEX
0.679
0.208
NOBOX
M09135_2.00
Homo sapiens
HTAATTRVB
VBYAATTAD
Misc
Kulakovskiy et al.(2013)
NOBOX_HUMAN.H11MO.0.C
0.642
0.245
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PEQ_0001388201-mRNA-1
Homeodomain
88
116
TRVRTVLNEKQLMTLKTCYAANARLSARV
PEQ_0001388201-mRNA-1
Homeodomain
107
130
AANARLSARVIRVWFQNKRCKDKK
Links
Other
Homeodomain
family TFs
Other
Parascaris equorum
TFs
121 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LDEC008146
Leptinotarsa decemlineata
LDEC008146
I
0.726
MCINX008871
Melitaea cinxia
MCINX008871
I
0.721
Aan_R011917
Calypte anna
Aan_R011917
I
0.721
Ogr03859
Ophisaurus gracilis
Ogr03859
I
0.721
ENSP00000360811-D1
Bos grunniens
ENSP00000360811-D1
I
0.714
ENSAMEG00000004942
Ailuropoda melanoleuca
ENSAMEG00000004942
I
0.713
EVEC_0000357701
Enterobius vermicularis
EVEC_0000357701
I
0.712
PRRX2
Cavia porcellus
ENSCPOG00000021821
I
0.710
ENSPSIG00000014030
Pelodiscus sinensis
ENSPSIG00000014030
I
0.710
MCINX007054
Melitaea cinxia
MCINX007054
I
0.705
HPBE_0000873701
Heligmosomoides bakeri
HPBE_0000873701
I
0.704
Gfo_R002825
Geospiza fortis
Gfo_R002825
I
0.702
NBR_0000705501
Nippostrongylus brasiliensis
NBR_0000705501
I
0.699
LHX6
Gorilla gorilla
ENSGGOG00000008310
I
0.698
ENSCSAVG00000000940
Ciona savignyi
ENSCSAVG00000000940
I
0.695
BGLB013824
Biomphalaria glabrata
BGLB013824
I
0.695
tetur14g02510
Tetranychus urticae
tetur14g02510
I
0.689
SVUK_0001056001
Strongylus vulgaris
SVUK_0001056001
I
0.687
tetur02g13510
Tetranychus urticae
tetur02g13510
I
0.683
HESX1
Homo sapiens
ENSG00000163666
D
0.679
ENSLACG00000001487
Latimeria chalumnae
ENSLACG00000001487
I
0.679
nRc.2.0.1.g35501
Romanomermis culicivorax
nRc.2.0.1.g35501
I
0.677
OESDEN_01216
Oesophagostomum dentatum
OESDEN_01216
I
0.675
fgenesh2_pg.scaffold_23000163
Branchiostoma floridae
fgenesh2_pg.scaffold_23000163
I
0.674
Cmyd_10001740
Chelonia mydas
Cmyd_10001740
I
0.673
TC000483
Tribolium castaneum
TC000483
I
0.672
ENSTSYG00000014450
Tarsius syrichta
ENSTSYG00000014450
I
0.668
CLEC007171
Cimex lectularius
CLEC007171
I
0.668
ALUE_0001497801
Ascaris lumbricoides
ALUE_0001497801
I
0.666
EFV55592
Trichinella spiralis
EFV55592
I
0.663
ENSFCAG00000029037
Felis catus
ENSFCAG00000029037
I
0.663
ACUA004306
Anopheles culicifacies
ACUA004306
I
0.663
nLs.2.1.2.g05836
Litomosoides sigmodontis
nLs.2.1.2.g05836
I
0.663
TELCIR_07728
Teladorsagia circumcincta
TELCIR_07728
I
0.662
ADAC001468
Anopheles darlingi
ADAC001468
I
0.659
ADAC008104
Anopheles darlingi
ADAC008104
I
0.659
CGI_10016653
Crassostrea gigas
CGI_10016653
I
0.659
NOBOX
Callithrix jacchus
ENSCJAG00000009917
I
0.659
GK22877
Drosophila willistoni
FBgn0224839
I
0.659
Ogr09065
Ophisaurus gracilis
Ogr09065
I
0.659
SNAPOd2T00016706001
Oikopleura dioica
SNAPOd2T00016706001
I
0.659
L892_g24303
Steinernema scapterisci
L892_g24303
I
0.659
MCOS_0000004601
Mesocestoides corti
MCOS_0000004601
I
0.659
nRc.2.0.1.g34428
Romanomermis culicivorax
nRc.2.0.1.g34428
I
0.659
TTRE_0000072001
Trichuris trichiura
TTRE_0000072001
I
0.659
DLX4
Bos taurus
ENSBTAG00000007353
I
0.658
ENSOARG00000005572
Ovis aries
ENSOARG00000005572
I
0.658
GF12207
Drosophila ananassae
FBgn0089246
I
0.658
ENSBTAP00000009672-D1
Bos grunniens
ENSBTAP00000009672-D1
I
0.658
ACUA026833
Anopheles culicifacies
ACUA026833
I
0.658
AMAM000848
Anopheles maculatus
AMAM000848
I
0.658
PPAI007004
Phlebotomus papatasi
PPAI007004
I
0.658
meox1
Takifugu rubripes
ENSTRUG00000005193
I
0.657
L798_06393
Zootermopsis nevadensis
L798_06393
I
0.656
HPLM_0000971301
Haemonchus placei
HPLM_0000971301
I
0.656
DLX3
Bos taurus
ENSBTAG00000017409
I
0.653
NOBOX
Equus caballus
ENSECAG00000003123
I
0.653
SPU_004366
Strongylocentrotus purpuratus
SPU_004366
I
0.653
Cflo_02794--XP_001120105.1_APIME
Camponotus floridanus
Cflo_02794--XP_001120105.1_APIME
I
0.652
ALUE_0000848601
Ascaris lumbricoides
ALUE_0000848601
I
0.652
BGLB004491
Biomphalaria glabrata
BGLB004491
I
0.651
ASIM_0001230001
Anisakis simplex
ASIM_0001230001
I
0.650
CGI_10009720
Crassostrea gigas
CGI_10009720
I
0.649
DLX4
Oryctolagus cuniculus
ENSOCUG00000022067
I
0.648
DICVIV_02647
Dictyocaulus viviparus
DICVIV_02647
I
0.648
SSLN_0001460801
Schistocephalus solidus
SSLN_0001460801
I
0.648
T265_14002
Opisthorchis viverrini
T265_14002
I
0.648
NOBOX
Myotis lucifugus
ENSMLUG00000004209
I
0.644
Myotis_brandtii_NOBOX_10026198
Myotis brandtii
Myotis_brandtii_NOBOX_10026198
I
0.644
lhx8b
Takifugu rubripes
ENSTRUG00000017607
I
0.643
ENSACAG00000002147
Anolis carolinensis
ENSACAG00000002147
I
0.642
ENSCSAG00000007090
Chlorocebus sabaeus
ENSCSAG00000007090
I
0.642
NOBOX
Felis catus
ENSFCAG00000004352
I
0.642
NOBOX
Homo sapiens
ENSG00000106410
D
0.642
NOBOX
Gorilla gorilla
ENSGGOG00000022185
I
0.642
NOBOX
Macaca mulatta
ENSMMUG00000020609
I
0.642
ENSMPUG00000007079
Mustela putorius furo
ENSMPUG00000007079
I
0.642
ENSNLEG00000003406
Nomascus leucogenys
ENSNLEG00000003406
I
0.642
NOBOX
Oryctolagus cuniculus
ENSOCUG00000001027
I
0.642
NOBOX
Otolemur garnettii
ENSOGAG00000010413
I
0.642
ENSPANG00000018829
Papio anubis
ENSPANG00000018829
I
0.642
NOBOX
Pan troglodytes
ENSPTRG00000019828
I
0.642
ENSSTOG00000026570
Ictidomys tridecemlineatus
ENSSTOG00000026570
I
0.642
HMEL006244
Heliconius melpomene
HMEL006244
I
0.642
ENSMMUP00000027138
Macaca fascicularis
ENSMMUP00000027138
I
0.642
ENSP00000419457-D1
Bos grunniens
ENSP00000419457-D1
I
0.642
Pvit_13361
Pogona vitticeps
Pvit_13361
I
0.642
DLX4
Myotis lucifugus
ENSMLUG00000007268
I
0.639
ENSMODG00000001675
Monodelphis domestica
ENSMODG00000001675
I
0.638
drgx
Takifugu rubripes
ENSTRUG00000013446
I
0.635
Cflo_04174--XP_001120833.1_APIME
Camponotus floridanus
Cflo_04174--XP_001120833.1_APIME
I
0.635
TCNE_0000653501
Toxocara canis
TCNE_0000653501
I
0.635
EFV57629
Trichinella spiralis
EFV57629
I
0.634
GF13343
Drosophila ananassae
FBgn0090375
I
0.634
D917_01051
Trichinella nativa
D917_01051
I
0.634
NECAME_16530
Necator americanus
NECAME_16530
I
0.634
SINV13346
Solenopsis invicta
SINV13346
I
0.632
TTAC_0000027101
Hydatigera taeniaeformis
TTAC_0000027101
I
0.632
BGIBMGA003233
Bombyx mori
BGIBMGA003233
I
0.631
HelroG173001
Helobdella robusta
HelroG173001
I
0.631
YQE_10100
Dendroctonus ponderosae
YQE_10100
I
0.631
SROB_0001564301
Schistosoma rodhaini
SROB_0001564301
I
0.631
L596_g8967
Steinernema carpocapsae
L596_g8967
I
0.630
AFAF008499
Anopheles farauti
AFAF008499
I
0.629
L798_11440
Zootermopsis nevadensis
L798_11440
I
0.627
NOBOX
Canis familiaris
ENSCAFG00000003500
I
0.625
ANCCAN_10593
Ancylostoma caninum
ANCCAN_10593
I
0.620
ENSMGAG00000013900
Meleagris gallopavo
ENSMGAG00000013900
I
0.619
HPLM_0001894101
Haemonchus placei
HPLM_0001894101
I
0.615
SBAD_0000602401
Soboliphyme baturini
SBAD_0000602401
I
0.614
EEL_0000220001
Elaeophora elaphi
EEL_0000220001
I
0.612
HCOI01026600
Haemonchus contortus
HCOI01026600
I
0.612
TELCIR_10796
Teladorsagia circumcincta
TELCIR_10796
I
0.612
TCNE_0001081001
Toxocara canis
TCNE_0001081001
I
0.609
HMEL016421
Heliconius melpomene
HMEL016421
I
0.607
BGLB009977
Biomphalaria glabrata
BGLB009977
I
0.605
Alligator_sinensis_CCG014496.1
Alligator sinensis
Alligator_sinensis_CCG014496.1
I
0.604
ECANG7_01330
Echinococcus canadensis
ECANG7_01330
I
0.604
TTAC_0001021101
Hydatigera taeniaeformis
TTAC_0001021101
N
0.604
ENSTSYG00000000516
Tarsius syrichta
ENSTSYG00000000516
I
0.600
BGLB014161
Biomphalaria glabrata
BGLB014161
I
0.599