CGI_10009720 (Crassostrea gigas)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 CGI_10009720 T205814_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HESX1
M03187_2.00 		Homo sapiens
NHTAATTRVH
DBYAATTADN		 SELEX
Jolma et al.(2013)
HESX1_1 		0.732 0.355
HESX1
M03188_2.00 		Homo sapiens
NTAATTRGYAATTAD
HTAATTRCYAATTAN		 SELEX
Jolma et al.(2013)
HESX1_2 		0.732 0.355
HESX1
M05227_2.00 		Homo sapiens
DYAATTRV
BYAATTRH		 SELEX
Yin et al.(2017)
HESX1_FL_HT-SELEX 		0.732 0.355
HESX1
M05228_2.00 		Homo sapiens
NYAATTRD
HYAATTRN		 SELEX
Yin et al.(2017)
HESX1_FL_Methyl-HT-SELEX 		0.732 0.355
NOBOX
M09135_2.00 		Homo sapiens
HTAATTRVB
VBYAATTAD		 Misc
Kulakovskiy et al.(2013)
NOBOX_HUMAN.H11MO.0.C 		0.663 0.613
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EKC30836 Homeodomain 387 404
EKC30836 Homeodomain 403 415

Links

Other Homeodomain family TFs
Other Crassostrea gigas TFs

115 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HPBE_0000873701 Heligmosomoides bakeri HPBE_0000873701 I 0.750
ENSLACG00000001487 Latimeria chalumnae ENSLACG00000001487 I 0.739
PRRX2 Cavia porcellus ENSCPOG00000021821 I 0.737
LHX6 Gorilla gorilla ENSGGOG00000008310 I 0.737
Aan_R011917 Calypte anna Aan_R011917 I 0.736
ENSP00000360811-D1 Bos grunniens ENSP00000360811-D1 I 0.735
HESX1 Homo sapiens ENSG00000163666 D 0.732
Ogr03859 Ophisaurus gracilis Ogr03859 I 0.728
ENSPSIG00000014030 Pelodiscus sinensis ENSPSIG00000014030 I 0.722
LDEC008146 Leptinotarsa decemlineata LDEC008146 I 0.722
MCINX007054 Melitaea cinxia MCINX007054 I 0.721
MCINX008871 Melitaea cinxia MCINX008871 I 0.721
tetur14g02510 Tetranychus urticae tetur14g02510 I 0.721
NBR_0000705501 Nippostrongylus brasiliensis NBR_0000705501 I 0.721
ENSFCAG00000029037 Felis catus ENSFCAG00000029037 I 0.720
NOBOX Oryctolagus cuniculus ENSOCUG00000001027 I 0.710
ACUA026833 Anopheles culicifacies ACUA026833 I 0.705
AMAM000848 Anopheles maculatus AMAM000848 I 0.705
ENSTSYG00000014450 Tarsius syrichta ENSTSYG00000014450 I 0.702
SVUK_0001056001 Strongylus vulgaris SVUK_0001056001 I 0.702
BGLB013824 Biomphalaria glabrata BGLB013824 I 0.695
ENSACAG00000002147 Anolis carolinensis ENSACAG00000002147 I 0.694
ENSCSAG00000007090 Chlorocebus sabaeus ENSCSAG00000007090 I 0.694
NOBOX Felis catus ENSFCAG00000004352 I 0.694
NOBOX Macaca mulatta ENSMMUG00000020609 I 0.694
ENSMPUG00000007079 Mustela putorius furo ENSMPUG00000007079 I 0.694
ENSNLEG00000003406 Nomascus leucogenys ENSNLEG00000003406 I 0.694
ENSPANG00000018829 Papio anubis ENSPANG00000018829 I 0.694
HMEL006244 Heliconius melpomene HMEL006244 I 0.694
ENSMMUP00000027138 Macaca fascicularis ENSMMUP00000027138 I 0.694
ENSP00000419457-D1 Bos grunniens ENSP00000419457-D1 I 0.694
Myotis_brandtii_NOBOX_10026198 Myotis brandtii Myotis_brandtii_NOBOX_10026198 I 0.694
MCOS_0000004601 Mesocestoides corti MCOS_0000004601 I 0.692
tetur02g13510 Tetranychus urticae tetur02g13510 I 0.691
OESDEN_01216 Oesophagostomum dentatum OESDEN_01216 I 0.690
ENSAMEG00000004942 Ailuropoda melanoleuca ENSAMEG00000004942 I 0.688
HPLM_0001894101 Haemonchus placei HPLM_0001894101 I 0.688
NOBOX Callithrix jacchus ENSCJAG00000009917 I 0.684
NOBOX Equus caballus ENSECAG00000003123 I 0.684
NOBOX Gorilla gorilla ENSGGOG00000022185 I 0.684
NOBOX Myotis lucifugus ENSMLUG00000004209 I 0.684
NOBOX Otolemur garnettii ENSOGAG00000010413 I 0.684
Gfo_R002825 Geospiza fortis Gfo_R002825 I 0.684
Pvit_13361 Pogona vitticeps Pvit_13361 I 0.684
YQE_10100 Dendroctonus ponderosae YQE_10100 I 0.683
ENSCSAVG00000000940 Ciona savignyi ENSCSAVG00000000940 I 0.682
ANCCAN_10593 Ancylostoma caninum ANCCAN_10593 I 0.681
meox1 Takifugu rubripes ENSTRUG00000005193 I 0.679
EFV55592 Trichinella spiralis EFV55592 I 0.675
GK22877 Drosophila willistoni FBgn0224839 I 0.675
Ogr09065 Ophisaurus gracilis Ogr09065 I 0.674
EVEC_0000357701 Enterobius vermicularis EVEC_0000357701 I 0.673
Cmyd_10001740 Chelonia mydas Cmyd_10001740 I 0.672
HelroG173001 Helobdella robusta HelroG173001 I 0.671
ENSMGAG00000013900 Meleagris gallopavo ENSMGAG00000013900 I 0.670
lhx8b Takifugu rubripes ENSTRUG00000017607 I 0.670
ENSSTOG00000026570 Ictidomys tridecemlineatus ENSSTOG00000026570 I 0.669
BGIBMGA003233 Bombyx mori BGIBMGA003233 I 0.666
HPLM_0000971301 Haemonchus placei HPLM_0000971301 I 0.666
TCNE_0000653501 Toxocara canis TCNE_0000653501 I 0.665
GF12207 Drosophila ananassae FBgn0089246 I 0.664
NOBOX Homo sapiens ENSG00000106410 D 0.663
NOBOX Pan troglodytes ENSPTRG00000019828 I 0.663
TC000483 Tribolium castaneum TC000483 I 0.663
ADAC001468 Anopheles darlingi ADAC001468 I 0.662
CLEC007171 Cimex lectularius CLEC007171 I 0.661
DICVIV_02647 Dictyocaulus viviparus DICVIV_02647 I 0.661
L892_g24303 Steinernema scapterisci L892_g24303 I 0.658
TTRE_0000072001 Trichuris trichiura TTRE_0000072001 I 0.658
CGI_10016653 Crassostrea gigas CGI_10016653 I 0.652
ALUE_0001497801 Ascaris lumbricoides ALUE_0001497801 I 0.652
nRc.2.0.1.g34428 Romanomermis culicivorax nRc.2.0.1.g34428 I 0.650
PEQ_0001388201 Parascaris equorum PEQ_0001388201 I 0.649
ENSMODG00000001675 Monodelphis domestica ENSMODG00000001675 I 0.648
ADAC008104 Anopheles darlingi ADAC008104 I 0.647
SSLN_0001460801 Schistocephalus solidus SSLN_0001460801 I 0.647
NOBOX Canis familiaris ENSCAFG00000003500 I 0.646
SPU_004366 Strongylocentrotus purpuratus SPU_004366 I 0.644
nRc.2.0.1.g35501 Romanomermis culicivorax nRc.2.0.1.g35501 I 0.642
nLs.2.1.2.g05836 Litomosoides sigmodontis nLs.2.1.2.g05836 I 0.641
DLX4 Oryctolagus cuniculus ENSOCUG00000022067 I 0.640
GF13343 Drosophila ananassae FBgn0090375 I 0.636
SNAPOd2T00016706001 Oikopleura dioica SNAPOd2T00016706001 I 0.636
Cflo_02794--XP_001120105.1_APIME Camponotus floridanus Cflo_02794--XP_001120105.1_APIME I 0.630
ACUA004306 Anopheles culicifacies ACUA004306 I 0.630
fgenesh2_pg.scaffold_23000163 Branchiostoma floridae fgenesh2_pg.scaffold_23000163 I 0.628
ASIM_0001230001 Anisakis simplex ASIM_0001230001 I 0.627
EFV57629 Trichinella spiralis EFV57629 I 0.626
Cflo_04174--XP_001120833.1_APIME Camponotus floridanus Cflo_04174--XP_001120833.1_APIME I 0.626
D917_01051 Trichinella nativa D917_01051 I 0.626
TCNE_0001081001 Toxocara canis TCNE_0001081001 I 0.626
scaffold251-EXSNAP2012.22 Pristionchus exspectatus scaffold251-EXSNAP2012.22 I 0.625
SROB_0001564301 Schistosoma rodhaini SROB_0001564301 I 0.625
drgx Takifugu rubripes ENSTRUG00000013446 I 0.624
TTAC_0000027101 Hydatigera taeniaeformis TTAC_0000027101 I 0.623
SVUK_0001599301 Strongylus vulgaris SVUK_0001599301 I 0.622
TELCIR_07728 Teladorsagia circumcincta TELCIR_07728 I 0.622
DLX4 Bos taurus ENSBTAG00000007353 I 0.620
ENSBTAP00000009672-D1 Bos grunniens ENSBTAP00000009672-D1 I 0.620
ENSOARG00000005572 Ovis aries ENSOARG00000005572 I 0.619
L798_06393 Zootermopsis nevadensis L798_06393 I 0.619
Eucgr.H02817 Eucalyptus grandis Eucgr.H02817 I 0.619
T265_02852 Opisthorchis viverrini T265_02852 I 0.618
EEL_0000220001 Elaeophora elaphi EEL_0000220001 I 0.617
ENSBTAP00000049813-D5 Bos grunniens ENSBTAP00000049813-D5 I 0.616
Cmyd_10012400 Chelonia mydas Cmyd_10012400 I 0.615
DLX3 Bos taurus ENSBTAG00000017409 I 0.614
NECAME_16530 Necator americanus NECAME_16530 I 0.612
DLX4 Myotis lucifugus ENSMLUG00000007268 I 0.611
ENSTSYG00000000516 Tarsius syrichta ENSTSYG00000000516 I 0.611
PPAI007004 Phlebotomus papatasi PPAI007004 I 0.607
T265_14002 Opisthorchis viverrini T265_14002 I 0.607
HMEL016421 Heliconius melpomene HMEL016421 I 0.604
AFAF008499 Anopheles farauti AFAF008499 I 0.604
ALUE_0000848601 Ascaris lumbricoides ALUE_0000848601 I 0.601