CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSNLEG00000012454
(
Nomascus leucogenys
)
IRF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00605 (IRF)
IPR001346
ENSNLEG00000012454
T244231_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
IRF5
M03332_2.00
Homo sapiens
YCGAAACCGAAMCY
RGKTTCGGTTTCGR
SELEX
Jolma et al.(2013)
IRF5_1
1.000
1.000
IRF5
M03333_2.00
Homo sapiens
HACCGAAACYV
BRGTTTCGGTD
SELEX
Jolma et al.(2013)
IRF5_2
1.000
1.000
IRF5
M05535_2.00
Homo sapiens
NCGAAACCGAWACH
DGTWTCGGTTTCGN
SELEX
Yin et al.(2017)
IRF5_eDBD_HT-SELEX
1.000
1.000
IRF5
M05537_2.00
Homo sapiens
NCGAAACCGAAACY
RGTTTCGGTTTCGN
SELEX
Yin et al.(2017)
IRF5_FL_HT-SELEX
1.000
1.000
IRF5
M10884_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF5_Q3
1.000
1.000
IRF5
M05536_2.00
Homo sapiens
NYGAWACYGAWACH
DGTWTCRGTWTCRN
SELEX
Yin et al.(2017)
IRF5_eDBD_Methyl-HT-SELEX
1.000
1.000
IRF5
M05538_2.00
Homo sapiens
NYGAAACCGAWACY
RGTWTCGGTTTCRN
SELEX
Yin et al.(2017)
IRF5_FL_Methyl-HT-SELEX
1.000
1.000
Irf5
M00177_2.00
Mus musculus
NNNHGADASH
DSTHTCDNNN
PBM
Badis et al.(2009)
Irf5_3874
0.971
0.971
IRF5
M02256_2.00
Oryctolagus cuniculus
NHCGAAACYN
NRGTTTCGDN
PBM
Weirauch et al.(2014)
pTH9272
0.962
0.962
IRF6
M02253_2.00
Gallus gallus
NNMCNAAWNN
NNWTTNGKNN
PBM
Weirauch et al.(2014)
pTH9178
0.724
0.724
IRF6
M02254_2.00
Meleagris gallopavo
NRNCGAWACY
RGTWTCGNYN
PBM
Weirauch et al.(2014)
pTH9210
0.724
0.724
irf5.L
M02260_2.00
Xenopus laevis
VNCGADACHN
NDGTHTCGNB
PBM
Weirauch et al.(2014)
pTH9367
0.724
0.724
irf6.2
M02259_2.00
Xenopus tropicalis
NVNHGAWACH
DGTWTCDNBN
PBM
Weirauch et al.(2014)
pTH9302
0.705
0.705
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSNLEP00000015162
IRF
16
121
RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC
Links
Other
IRF
family TFs
Other
Nomascus leucogenys
TFs
71 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sakowv30034954m.g
Saccoglossus kowalevskii
Sakowv30034954m.g
N
Sakowv30034955m.g
Saccoglossus kowalevskii
Sakowv30034955m.g
N
Sakowv30034956m.g
Saccoglossus kowalevskii
Sakowv30034956m.g
N
Sakowv30034957m.g
Saccoglossus kowalevskii
Sakowv30034957m.g
N
Sakowv30034959m.g
Saccoglossus kowalevskii
Sakowv30034959m.g
N
Sakowv30034960m.g
Saccoglossus kowalevskii
Sakowv30034960m.g
N
Sakowv30034963m.g
Saccoglossus kowalevskii
Sakowv30034963m.g
N
Sakowv30034965m.g
Saccoglossus kowalevskii
Sakowv30034965m.g
N
Sakowv30036994m.g
Saccoglossus kowalevskii
Sakowv30036994m.g
N
Sakowv30036995m.g
Saccoglossus kowalevskii
Sakowv30036995m.g
N
Sakowv30036996m.g
Saccoglossus kowalevskii
Sakowv30036996m.g
N
Sakowv30036997m.g
Saccoglossus kowalevskii
Sakowv30036997m.g
N
Sakowv30036999m.g
Saccoglossus kowalevskii
Sakowv30036999m.g
N
Sakowv30037000m.g
Saccoglossus kowalevskii
Sakowv30037000m.g
N
Sakowv30037002m.g
Saccoglossus kowalevskii
Sakowv30037002m.g
N
Sakowv30037003m.g
Saccoglossus kowalevskii
Sakowv30037003m.g
N
Sakowv30037004m.g
Saccoglossus kowalevskii
Sakowv30037004m.g
I
Sakowv30037005m.g
Saccoglossus kowalevskii
Sakowv30037005m.g
N
Sakowv30037006m.g
Saccoglossus kowalevskii
Sakowv30037006m.g
N
Sakowv30037007m.g
Saccoglossus kowalevskii
Sakowv30037007m.g
I
Sakowv30037008m.g
Saccoglossus kowalevskii
Sakowv30037008m.g
N
Sakowv30037009m.g
Saccoglossus kowalevskii
Sakowv30037009m.g
N
Sakowv30037015m.g
Saccoglossus kowalevskii
Sakowv30037015m.g
I
Sakowv30037024m.g
Saccoglossus kowalevskii
Sakowv30037024m.g
N
Sakowv30037025m.g
Saccoglossus kowalevskii
Sakowv30037025m.g
N
Sakowv30037033m.g
Saccoglossus kowalevskii
Sakowv30037033m.g
N
Sakowv30037034m.g
Saccoglossus kowalevskii
Sakowv30037034m.g
N
Sakowv30037039m.g
Saccoglossus kowalevskii
Sakowv30037039m.g
I
Sakowv30037045m.g
Saccoglossus kowalevskii
Sakowv30037045m.g
I
Sakowv30037046m.g
Saccoglossus kowalevskii
Sakowv30037046m.g
N
Sakowv30037050m.g
Saccoglossus kowalevskii
Sakowv30037050m.g
I
Sakowv30037051m.g
Saccoglossus kowalevskii
Sakowv30037051m.g
N
Sakowv30037052m.g
Saccoglossus kowalevskii
Sakowv30037052m.g
N
Sakowv30037056m.g
Saccoglossus kowalevskii
Sakowv30037056m.g
N