irf8 (Oryzias latipes)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSORLG00000018216 T244300_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF8
M03335_2.00 		Homo sapiens
HCGAAACYGAAACY
RGTTTCRGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_1 		0.885 0.885
IRF8
M03336_2.00 		Homo sapiens
HCGAAACCGAAACT
AGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_2 		0.885 0.885
IRF8
M05541_2.00 		Homo sapiens
NYGAAASYGAAASHN
NDSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_HT-SELEX 		0.885 0.885
IRF8
M05543_2.00 		Homo sapiens
NCGAAACYGAAACYN
NRGTTTCRGTTTCGN		 SELEX
Yin et al.(2017)
IRF8_FL_HT-SELEX 		0.885 0.885
IRF8
M09236_2.00 		Homo sapiens
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_HUMAN.H11MO.0.B 		0.885 0.885
IRF8
M10890_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ICSBP_Q6 		0.885 0.885
IRF8
M10891_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF8_Q6 		0.885 0.885
IRF8
M05542_2.00 		Homo sapiens
NYGAAASYGAAASYN
NRSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_Methyl-HT-SELEX 		0.885 0.885
IRF8
M05544_2.00 		Homo sapiens
NYGAAASYGAAACYD
HRGTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_FL_Methyl-HT-SELEX 		0.885 0.885
Irf8
M09246_2.00 		Mus musculus
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_MOUSE.H11MO.0.A 		0.865 0.865
Irf4
M00175_2.00 		Mus musculus
NNNYGAWASN
NSTWTCRNNN		 PBM
Badis et al.(2009)
Irf4_3476 		0.769 0.769
IRF4
M03334_2.00 		Homo sapiens
HCGAAACCGAAACYW
WRGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF4_1 		0.769 0.769
IRF4
M05539_2.00 		Homo sapiens
NYGAAACYGAAACYN
NRGTTTCRGTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_HT-SELEX 		0.769 0.769
IRF4
M07978_2.00 		Homo sapiens
DNDVNNGWWVTGAVWVWN
NWBWBTCABWWCNNBHNH		 ChIP-seq
Gerstein et al.(2012)
GM12878_IRF4_HudsonAlpha 		0.769 0.769
IRF4
M09235_2.00 		Homo sapiens
NDWDRRGGAASTGARAVH
DBTYTCASTTCCYYHWHN		 Misc
Kulakovskiy et al.(2013)
IRF4_HUMAN.H11MO.0.A 		0.769 0.769
Irf4
M09243_2.00 		Mus musculus
NDAWVVRGAASTGARAVH
DBTYTCASTTCYBBWTHN		 Misc
Kulakovskiy et al.(2013)
IRF4_MOUSE.H11MO.0.A 		0.769 0.769
IRF4
M09595_2.00 		Homo sapiens
HNYGAAASYD
HRSTTTCRND		 Misc
Heinz et al.(2010)
GM12878-IRF4_GSE32465 		0.769 0.769
IRF4
M10885_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_07 		0.769 0.769
IRF4
M10886_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_08 		0.769 0.769
IRF4
M10887_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5_01 		0.769 0.769
IRF4
M10888_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5 		0.769 0.769
IRF4
M10889_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q6 		0.769 0.769
IRF4
M05540_2.00 		Homo sapiens
NYGAAASYGAWASHN
NDSTWTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_Methyl-HT-SELEX 		0.769 0.769
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000022814 IRF 8 111

Links

Other IRF family TFs
Other Oryzias latipes TFs

166 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAA92048 Xenopus laevis AAA92048 I
AAA92050 Xenopus laevis AAA92050 I
AAH44064 Xenopus laevis AAH44064 I
Aan_R011701 Calypte anna Aan_R011701 I
Aan_R011985 Calypte anna Aan_R011985 I
Afo_R000660 Aptenodytes forsteri Afo_R000660 I
Afo_R010055 Aptenodytes forsteri Afo_R010055 I
Afo_R014990 Aptenodytes forsteri Afo_R014990 I
Alligator_sinensis_CCG017304.1 Alligator sinensis Alligator_sinensis_CCG017304.1 I
Alligator_sinensis_CCG017823.1 Alligator sinensis Alligator_sinensis_CCG017823.1 I
Brh_R007211 Buceros rhinoceros Brh_R007211 I
Cmyd_10006705 Chelonia mydas Cmyd_10006705 I
Cmyd_10006706 Chelonia mydas Cmyd_10006706 I
Cmyd_10020160 Chelonia mydas Cmyd_10020160 I
TCF4 Anolis carolinensis ENSACAG00000008863 I
TCF12 Anolis carolinensis ENSACAG00000014277 I
ENSACAG00000027602 Anolis carolinensis ENSACAG00000027602 I
ENSAMEG00000003503 Ailuropoda melanoleuca ENSAMEG00000003503 I
ENSAMEG00000010612 Ailuropoda melanoleuca ENSAMEG00000010612 I
ENSAMEG00000017162 Ailuropoda melanoleuca ENSAMEG00000017162 I
ENSAMXG00000006548 Astyanax mexicanus ENSAMXG00000006548 I
ENSAMXG00000009833 Astyanax mexicanus ENSAMXG00000009833 I
ENSAMXG00000014804 Astyanax mexicanus ENSAMXG00000014804 I
ENSAMXG00000017947 Astyanax mexicanus ENSAMXG00000017947 I
ENSAPLG00000001939 Anas platyrhynchos ENSAPLG00000001939 I
ENSAPLG00000011135 Anas platyrhynchos ENSAPLG00000011135 I
TCF12 Bos taurus ENSBTAG00000002586 I
TCF3 Bos taurus ENSBTAG00000008695 I
TCF4 Bos taurus ENSBTAG00000016462 I
ENSBTAP00000028599-D1 Bos grunniens ENSBTAP00000028599-D1 I
ENSBTAP00000048638-D1 Bos grunniens ENSBTAP00000048638-D1 I
TCF4 Canis familiaris ENSCAFG00000000140 I
TCF12 Canis familiaris ENSCAFG00000016200 I
TCF4 Choloepus hoffmanni ENSCHOG00000000331 I
TCF12 Choloepus hoffmanni ENSCHOG00000003168 I
TCF4 Callithrix jacchus ENSCJAG00000004038 I
TCF3 Callithrix jacchus ENSCJAG00000004642 I
TCF12 Cavia porcellus ENSCPOG00000009153 I
TCF3 Cavia porcellus ENSCPOG00000023586 I
ENSCSAG00000011901 Chlorocebus sabaeus ENSCSAG00000011901 I
ENSCSAG00000018141 Chlorocebus sabaeus ENSCSAG00000018141 I
tcf12 Danio rerio ENSDARG00000004714 I
tcf3a Danio rerio ENSDARG00000005915 I
tcf3b Danio rerio ENSDARG00000099999 I
ENSDNOG00000013859 Dasypus novemcinctus ENSDNOG00000013859 I
ENSDNOG00000042880 Dasypus novemcinctus ENSDNOG00000042880 I
Tcf3 Dipodomys ordii ENSDORG00000004745 I
Tcf4 Dipodomys ordii ENSDORG00000012697 I
TCF3 Equus caballus ENSECAG00000000623 I
TCF12 Equus caballus ENSECAG00000011678 I
TCF4 Equus caballus ENSECAG00000017265 I
TCF4 Erinaceus europaeus ENSEEUG00000000134 I
TCF12 Erinaceus europaeus ENSEEUG00000002182 I
TCF3 Echinops telfairi ENSETEG00000015388 I
ENSFALG00000011409 Ficedula albicollis ENSFALG00000011409 I
ENSFALG00000012146 Ficedula albicollis ENSFALG00000012146 I
TCF4 Felis catus ENSFCAG00000014682 I
TCF3 Felis catus ENSFCAG00000023514 I
TCF12 Felis catus ENSFCAG00000031674 I
TCF3 Homo sapiens ENSG00000071564 D
TCF12 Homo sapiens ENSG00000140262 D
TCF4 Homo sapiens ENSG00000196628 D
ENSGACG00000000628 Gasterosteus aculeatus ENSGACG00000000628 I
TCF12 Gasterosteus aculeatus ENSGACG00000006101 I
tcf3b Gasterosteus aculeatus ENSGACG00000012737 I
tcf3a Gasterosteus aculeatus ENSGACG00000015282 I
tcf12 Gasterosteus aculeatus ENSGACG00000015831 I
TCF3 Gallus gallus ENSGALG00000001093 I
TCF12 Gallus gallus ENSGALG00000004304 I
TCF3 Gorilla gorilla ENSGGOG00000003667 I
TCF12 Gorilla gorilla ENSGGOG00000008166 I
TCF4 Gorilla gorilla ENSGGOG00000016297 I
ENSGMOG00000004189 Gadus morhua ENSGMOG00000004189 I
ENSGMOG00000008934 Gadus morhua ENSGMOG00000008934 I
ENSGMOG00000012207 Gadus morhua ENSGMOG00000012207 I
ENSGMOG00000015710 Gadus morhua ENSGMOG00000015710 I
ENSGMOG00000018104 Gadus morhua ENSGMOG00000018104 I
ENSLACG00000003485 Latimeria chalumnae ENSLACG00000003485 I
ENSLACG00000014145 Latimeria chalumnae ENSLACG00000014145 I
ENSLACG00000016589 Latimeria chalumnae ENSLACG00000016589 I
TCF12 Loxodonta africana ENSLAFG00000010546 I
TCF4 Loxodonta africana ENSLAFG00000013449 I
TCF3 Loxodonta africana ENSLAFG00000026277 I
ENSLOCG00000003538 Lepisosteus oculatus ENSLOCG00000003538 I
ENSLOCG00000006013 Lepisosteus oculatus ENSLOCG00000006013 I
ENSLOCG00000013539 Lepisosteus oculatus ENSLOCG00000013539 I
ENSMEUG00000003794 Macropus eugenii ENSMEUG00000003794 I
ENSMEUG00000014058 Macropus eugenii ENSMEUG00000014058 I
TCF3 Meleagris gallopavo ENSMGAG00000002388 I
ENSMGAG00000005667 Meleagris gallopavo ENSMGAG00000005667 I
TCF12 Microcebus murinus ENSMICG00000009110 I
TCF4 Microcebus murinus ENSMICG00000012305 I
TCF12 Myotis lucifugus ENSMLUG00000006205 I
TCF3 Myotis lucifugus ENSMLUG00000011221 I
ENSMLUG00000012927 Myotis lucifugus ENSMLUG00000012927 I
TCF12 Macaca mulatta ENSMMUG00000004091 I
TCF3 Macaca mulatta ENSMMUG00000009017 I
TCF4 Macaca mulatta ENSMMUG00000012001 I
TCF3 Monodelphis domestica ENSMODG00000004143 I
TCF12 Monodelphis domestica ENSMODG00000008311 I
TCF4 Monodelphis domestica ENSMODG00000020455 I
ENSMPUG00000004438 Mustela putorius furo ENSMPUG00000004438 I
ENSMPUG00000008024 Mustela putorius furo ENSMPUG00000008024 I
ENSMPUG00000016460 Mustela putorius furo ENSMPUG00000016460 I
Tcf3 Mus musculus ENSMUSG00000020167 D
Tcf12 Mus musculus ENSMUSG00000032228 D
Tcf4 Mus musculus ENSMUSG00000053477 D
ENSNLEG00000001742 Nomascus leucogenys ENSNLEG00000001742 I
ENSNLEG00000006707 Nomascus leucogenys ENSNLEG00000006707 I
ENSNLEG00000007981 Nomascus leucogenys ENSNLEG00000007981 I
TCF4 Ornithorhynchus anatinus ENSOANG00000003082 I
TCF12 Ornithorhynchus anatinus ENSOANG00000009462 I
TCF3 Ornithorhynchus anatinus ENSOANG00000014335 I
ENSOARG00000005018 Ovis aries ENSOARG00000005018 I
ENSOARG00000012495 Ovis aries ENSOARG00000012495 I
ENSOARG00000020872 Ovis aries ENSOARG00000020872 I
TCF4 Oryctolagus cuniculus ENSOCUG00000002669 I
TCF12 Oryctolagus cuniculus ENSOCUG00000017812 I
TCF3 Otolemur garnettii ENSOGAG00000003587 I
ENSOGAG00000005735 Otolemur garnettii ENSOGAG00000005735 I
TCF12 Otolemur garnettii ENSOGAG00000006485 I
ENSONIG00000004816 Oreochromis niloticus ENSONIG00000004816 I
ENSONIG00000005794 Oreochromis niloticus ENSONIG00000005794 I
ENSONIG00000008337 Oreochromis niloticus ENSONIG00000008337 I
ENSONIG00000010206 Oreochromis niloticus ENSONIG00000010206 I
ENSONIG00000012720 Oreochromis niloticus ENSONIG00000012720 I
tcf3b Oryzias latipes ENSORLG00000004923 I
TCF12 Oryzias latipes ENSORLG00000005330 I
tcf12 Oryzias latipes ENSORLG00000008508 I
ENSORLG00000015062 Oryzias latipes ENSORLG00000015062 I
ENSP00000331057 Macaca fascicularis ENSP00000331057 I
ENSP00000378813 Macaca fascicularis ENSP00000378813 I
ENSP00000381382 Macaca fascicularis ENSP00000381382 I
ENSP00000381382-D1 Bos grunniens ENSP00000381382-D1 I
ENSPANG00000016063 Papio anubis ENSPANG00000016063 I
ENSPANG00000017265 Papio anubis ENSPANG00000017265 I
ENSPFOG00000001904 Poecilia formosa ENSPFOG00000001904 I
ENSPFOG00000004140 Poecilia formosa ENSPFOG00000004140 I
ENSPFOG00000009937 Poecilia formosa ENSPFOG00000009937 I
ENSPFOG00000024249 Poecilia formosa ENSPFOG00000024249 I
ENSPMAG00000000958 Petromyzon marinus ENSPMAG00000000958 I
ENSPPYG00000006505 Pongo abelii ENSPPYG00000006505 I
ENSPPYG00000009175 Pongo abelii ENSPPYG00000009175 I
ENSPPYG00000009327 Pongo abelii ENSPPYG00000009327 I
ENSPSIG00000004202 Pelodiscus sinensis ENSPSIG00000004202 I
ENSPSIG00000011880 Pelodiscus sinensis ENSPSIG00000011880 I
ENSPSIG00000014469 Pelodiscus sinensis ENSPSIG00000014469 I
TCF12 Pan troglodytes ENSPTRG00000007109 I
TCF4 Pan troglodytes ENSPTRG00000010040 I
TCF3 Pan troglodytes ENSPTRG00000010211 I
TCF4 Pteropus vampyrus ENSPVAG00000002074 I
TCF12 Pteropus vampyrus ENSPVAG00000006184 I
TCF3 Pteropus vampyrus ENSPVAG00000014587 I
Tcf4 Rattus norvegicus ENSRNOG00000012405 I
Tcf3 Rattus norvegicus ENSRNOG00000051499 I
Tcf12 Rattus norvegicus ENSRNOG00000057754 I
TCF4 Sorex araneus ENSSARG00000001666 I
TCF12 Sorex araneus ENSSARG00000013798 I
ENSSHAG00000013735 Sarcophilus harrisii ENSSHAG00000013735 I
ENSSHAG00000014955 Sarcophilus harrisii ENSSHAG00000014955 I
ENSSHAG00000015935 Sarcophilus harrisii ENSSHAG00000015935 I
TCF4 Sus scrofa ENSSSCG00000004535 I
TCF3 Sus scrofa ENSSSCG00000013437 I
ENSSTOG00000001523 Ictidomys tridecemlineatus ENSSTOG00000001523 I
ENSSTOG00000005134 Ictidomys tridecemlineatus ENSSTOG00000005134 I
ENSSTOG00000010293 Ictidomys tridecemlineatus ENSSTOG00000010293 I
TCF12 Tupaia belangeri ENSTBEG00000002192 I
TCF4 Tupaia belangeri ENSTBEG00000015498 I
TCF3 Taeniopygia guttata ENSTGUG00000000208 I
TCF12 Taeniopygia guttata ENSTGUG00000006270 I
tcf12 Tetraodon nigroviridis ENSTNIG00000009326 I
ENSTNIG00000010330 Tetraodon nigroviridis ENSTNIG00000010330 I
ENSTNIG00000013705 Tetraodon nigroviridis ENSTNIG00000013705 I
tcf3a Tetraodon nigroviridis ENSTNIG00000015322 I
ENSTRUG00000002569 Takifugu rubripes ENSTRUG00000002569 I
TCF12 Takifugu rubripes ENSTRUG00000008110 I
tcf3a Takifugu rubripes ENSTRUG00000008147 I
tcf12 Takifugu rubripes ENSTRUG00000017855 I
tcf3b Takifugu rubripes ENSTRUG00000017901 I
ENSTSYG00000009264 Tarsius syrichta ENSTSYG00000009264 I
ENSTSYG00000009542 Tarsius syrichta ENSTSYG00000009542 I
TCF12 Tursiops truncatus ENSTTRG00000010817 I
TCF4 Tursiops truncatus ENSTTRG00000011542 I
TCF12 Vicugna pacos ENSVPAG00000006545 I
ENSXMAG00000006665 Xiphophorus maculatus ENSXMAG00000006665 I
ENSXMAG00000011822 Xiphophorus maculatus ENSXMAG00000011822 I
ENSXMAG00000012718 Xiphophorus maculatus ENSXMAG00000012718 I
ENSXMAG00000014303 Xiphophorus maculatus ENSXMAG00000014303 I
Gfo_R004309 Geospiza fortis Gfo_R004309 I
Gfo_R007595 Geospiza fortis Gfo_R007595 I
Myotis_brandtii_Tcf12_10010436 Myotis brandtii Myotis_brandtii_Tcf12_10010436 I
Myotis_brandtii_Tcf4_10017301 Myotis brandtii Myotis_brandtii_Tcf4_10017301 I
Ocbimv22006241m.g Octopus bimaculoides Ocbimv22006241m.g I
Ogr01317 Ophisaurus gracilis Ogr01317 I
Ogr01318 Ophisaurus gracilis Ogr01318 I
Ogr02020 Ophisaurus gracilis Ogr02020 I
Ogr11405 Ophisaurus gracilis Ogr11405 I
Pvit_09822 Pogona vitticeps Pvit_09822 I
Pvit_17395 Pogona vitticeps Pvit_17395 I
Pvit_19114 Pogona vitticeps Pvit_19114 I
Sakowv30044282m.g Saccoglossus kowalevskii Sakowv30044282m.g I
SMAR008523 Strigamia maritima SMAR008523 I
SNAPOd2T00003591001 Oikopleura dioica SNAPOd2T00003591001 I
SPU_016343 Strongylocentrotus purpuratus SPU_016343 I
tetur02g08700 Tetranychus urticae tetur02g08700 I
tcf4 Xenopus tropicalis XB-GENE-1011628 I
tcf4.S Xenopus laevis XB-GENE-1011632 I
tcf3 Xenopus tropicalis XB-GENE-478265 I
tcf12 Xenopus laevis XB-GENE-5799694 I
tcf12 Xenopus tropicalis XB-GENE-5799694 I
tcf12.L Xenopus laevis XB-GENE-5799717 I
tcf3.L Xenopus laevis XB-GENE-865159 I
XP_002153906.1 Hydra magnipapillata XP_002153906.1 I