SNAPOd2T00003591001 (Oikopleura dioica)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 SNAPOd2T00003591001 T051736_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tcf3
M00753_2.00 		Mus musculus
VCACCTGBN
NVCAGGTGB		 PBM
Weirauch et al.(2013)
pTH3866 		0.858 0.827
Tcf3
M01723_2.00 		Mus musculus
NNVCACSTGB
VCASGTGBNN		 PBM
Weirauch et al.(2014)
pTH4580 		0.858 0.827
Tcf3
M00118_2.00 		Mus musculus
VCAYCTGB
VCAGRTGB		 PBM
Badis et al.(2009)
Tcfe2a_3865 		0.858 0.827
Tcf12
M01740_2.00 		Mus musculus
NVCAYCTGB
VCAGRTGBN		 PBM
Weirauch et al.(2014)
pTH5071 		0.858 0.808
TCF12
M04137_2.00 		Homo sapiens
VCACSTGB
VCASGTGB		 SELEX
Yin et al.(2017)
TCF12_eDBD_HT-SELEX 		0.858 0.808
Tcf12
M08062_2.00 		Mus musculus
RRCAGCTGNNN
NNNCAGCTGYY		 ChIP-seq
Mathelier et al.(2014)
MA0521.1 		0.858 0.808
TCF12
M07805_2.00 		Homo sapiens
NVDSCAGSTGB
VCASCTGSHBN		 ChIP-seq
Gerstein et al.(2012)
GM12878_TCF12_HudsonAlpha 		0.858 0.808
TCF12
M07806_2.00 		Homo sapiens
VCASCTGB
VCAGSTGB		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_TCF12_HudsonAlpha 		0.858 0.808
TCF12
M08731_2.00 		Homo sapiens
CMCASCTGSH
DSCAGSTGKG		 Misc
Kulakovskiy et al.(2013)
HTF4_HUMAN.H11MO.0.A 		0.858 0.808
Tcf12
M08762_2.00 		Mus musculus
VMCASCTGSH
DSCAGSTGKB		 Misc
Kulakovskiy et al.(2013)
HTF4_MOUSE.H11MO.0.A 		0.858 0.808
TCF12
M09458_2.00 		Homo sapiens
NNVCAGCTGB
VCAGCTGBNN		 Misc
Heinz et al.(2010)
GM12878-Tcf12_GSE32465 		0.858 0.808
TCF12
M09858_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HEB_Q6 		0.858 0.808
TCF12
M09859_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HTF4_Q2 		0.858 0.808
TCF12
M09860_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_01 		0.858 0.808
TCF12
M09861_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_03 		0.858 0.808
TCF12
M09862_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_05 		0.858 0.808
TCF12
M04138_2.00 		Homo sapiens
NCAYCTGN
NCAGRTGN		 SELEX
Yin et al.(2017)
TCF12_eDBD_Methyl-HT-SELEX 		0.858 0.808
Tcf4
M01750_2.00 		Mus musculus
VCAGVTGBN
NVCABCTGB		 PBM
Weirauch et al.(2014)
pTH5101 		0.855 0.808
TCF4
M02807_2.00 		Homo sapiens
HRCACCTGBN
NVCAGGTGYD		 SELEX
Jolma et al.(2013)
TCF4_1 		0.855 0.808
TCF4
M02808_2.00 		Homo sapiens
NVCACCTBBN
NVVAGGTGBN		 SELEX
Jolma et al.(2013)
TCF4_2 		0.855 0.808
TCF4
M02728_2.00 		Homo sapiens
RCACCTG
CAGGTGY		 SELEX
Jolma et al.(2010)
TCF4_dimer 		0.855 0.808
TCF4
M04214_2.00 		Homo sapiens
VCACCTGB
VCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_HT-SELEX 		0.855 0.808
Tcf4
M08775_2.00 		Mus musculus
HRCACCTGB
VCAGGTGYD		 Misc
Kulakovskiy et al.(2013)
ITF2_MOUSE.H11MO.0.B 		0.855 0.808
TCF4
M09461_2.00 		Homo sapiens
ASWTCAAAGRVN
NBYCTTTGAWST		 Misc
Heinz et al.(2010)
Hct116-Tcf4_SRA012054 		0.855 0.808
TCF4
M04215_2.00 		Homo sapiens
VCACCTGN
NCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_Methyl-HT-SELEX 		0.855 0.808
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SNAPOd2T00003591001 bHLH 20 73

Links

Other bHLH family TFs
Other Oikopleura dioica TFs

161 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSACAG00000027602 Anolis carolinensis ENSACAG00000027602 I 0.888
TCF3 Callithrix jacchus ENSCJAG00000004642 I 0.888
TCF3 Felis catus ENSFCAG00000023514 I 0.888
TCF3 Homo sapiens ENSG00000071564 D 0.888
TCF3 Gallus gallus ENSGALG00000001093 I 0.888
TCF3 Gorilla gorilla ENSGGOG00000003667 I 0.888
TCF3 Meleagris gallopavo ENSMGAG00000002388 I 0.888
TCF3 Macaca mulatta ENSMMUG00000009017 I 0.888
ENSPANG00000016063 Papio anubis ENSPANG00000016063 I 0.888
tcf12 Tetraodon nigroviridis ENSTNIG00000009326 I 0.888
ENSTNIG00000010330 Tetraodon nigroviridis ENSTNIG00000010330 I 0.888
ENSTRUG00000002569 Takifugu rubripes ENSTRUG00000002569 I 0.888
tcf12 Takifugu rubripes ENSTRUG00000017855 I 0.888
Cmyd_10006705 Chelonia mydas Cmyd_10006705 I 0.888
Ogr01317 Ophisaurus gracilis Ogr01317 I 0.888
tcf3 Xenopus tropicalis XB-GENE-478265 I 0.885
XP_002153906.1 Hydra magnipapillata XP_002153906.1 I 0.871
SPU_016343 Strongylocentrotus purpuratus SPU_016343 I 0.863
ML223014a Mnemiopsis leidyi ML223014a N 0.860
D918_01871 Trichuris suis D918_01871 I 0.860
TMUE_s0043005200 Trichuris muris TMUE_s0043005200 I 0.860
TTRE_0000494001 Trichuris trichiura TTRE_0000494001 I 0.860
TCF12 Anolis carolinensis ENSACAG00000014277 I 0.858
ENSAMEG00000010612 Ailuropoda melanoleuca ENSAMEG00000010612 I 0.858
ENSAMXG00000014804 Astyanax mexicanus ENSAMXG00000014804 I 0.858
TCF12 Bos taurus ENSBTAG00000002586 I 0.858
TCF3 Bos taurus ENSBTAG00000008695 I 0.858
TCF12 Canis familiaris ENSCAFG00000016200 I 0.858
TCF12 Choloepus hoffmanni ENSCHOG00000003168 I 0.858
TCF12 Cavia porcellus ENSCPOG00000009153 I 0.858
ENSCSAG00000011901 Chlorocebus sabaeus ENSCSAG00000011901 I 0.858
tcf12 Danio rerio ENSDARG00000004714 I 0.858
ENSDNOG00000042880 Dasypus novemcinctus ENSDNOG00000042880 I 0.858
TCF3 Equus caballus ENSECAG00000000623 I 0.858
TCF12 Equus caballus ENSECAG00000011678 I 0.858
TCF12 Erinaceus europaeus ENSEEUG00000002182 I 0.858
ENSFALG00000012146 Ficedula albicollis ENSFALG00000012146 I 0.858
TCF12 Felis catus ENSFCAG00000031674 I 0.858
TCF12 Homo sapiens ENSG00000140262 D 0.858
TCF12 Gasterosteus aculeatus ENSGACG00000006101 I 0.858
tcf12 Gasterosteus aculeatus ENSGACG00000015831 I 0.858
TCF12 Gallus gallus ENSGALG00000004304 I 0.858
TCF12 Gorilla gorilla ENSGGOG00000008166 I 0.858
ENSLACG00000014145 Latimeria chalumnae ENSLACG00000014145 I 0.858
TCF12 Loxodonta africana ENSLAFG00000010546 I 0.858
TCF3 Loxodonta africana ENSLAFG00000026277 I 0.858
ENSLOCG00000013539 Lepisosteus oculatus ENSLOCG00000013539 I 0.858
ENSMGAG00000005667 Meleagris gallopavo ENSMGAG00000005667 I 0.858
TCF12 Microcebus murinus ENSMICG00000009110 I 0.858
TCF12 Myotis lucifugus ENSMLUG00000006205 I 0.858
TCF12 Macaca mulatta ENSMMUG00000004091 I 0.858
TCF12 Monodelphis domestica ENSMODG00000008311 I 0.858
ENSMPUG00000004438 Mustela putorius furo ENSMPUG00000004438 I 0.858
Tcf3 Mus musculus ENSMUSG00000020167 D 0.858
Tcf12 Mus musculus ENSMUSG00000032228 D 0.858
ENSNLEG00000006707 Nomascus leucogenys ENSNLEG00000006707 I 0.858
TCF12 Ornithorhynchus anatinus ENSOANG00000009462 I 0.858
ENSOARG00000020872 Ovis aries ENSOARG00000020872 I 0.858
TCF12 Oryctolagus cuniculus ENSOCUG00000017812 I 0.858
TCF12 Otolemur garnettii ENSOGAG00000006485 I 0.858
ENSONIG00000005794 Oreochromis niloticus ENSONIG00000005794 I 0.858
ENSONIG00000008337 Oreochromis niloticus ENSONIG00000008337 I 0.858
TCF12 Oryzias latipes ENSORLG00000005330 I 0.858
tcf12 Oryzias latipes ENSORLG00000008508 I 0.858
ENSPANG00000017265 Papio anubis ENSPANG00000017265 I 0.858
ENSPFOG00000004140 Poecilia formosa ENSPFOG00000004140 I 0.858
ENSPFOG00000024249 Poecilia formosa ENSPFOG00000024249 I 0.858
ENSPPYG00000006505 Pongo abelii ENSPPYG00000006505 I 0.858
ENSPSIG00000011880 Pelodiscus sinensis ENSPSIG00000011880 I 0.858
TCF12 Pan troglodytes ENSPTRG00000007109 I 0.858
TCF12 Pteropus vampyrus ENSPVAG00000006184 I 0.858
Tcf3 Rattus norvegicus ENSRNOG00000051499 I 0.858
Tcf12 Rattus norvegicus ENSRNOG00000057754 I 0.858
TCF12 Sorex araneus ENSSARG00000013798 I 0.858
ENSSHAG00000015935 Sarcophilus harrisii ENSSHAG00000015935 I 0.858
ENSSTOG00000001523 Ictidomys tridecemlineatus ENSSTOG00000001523 I 0.858
TCF12 Tupaia belangeri ENSTBEG00000002192 I 0.858
TCF12 Taeniopygia guttata ENSTGUG00000006270 I 0.858
ENSTNIG00000013705 Tetraodon nigroviridis ENSTNIG00000013705 I 0.858
TCF12 Takifugu rubripes ENSTRUG00000008110 I 0.858
ENSTSYG00000009264 Tarsius syrichta ENSTSYG00000009264 I 0.858
TCF12 Tursiops truncatus ENSTTRG00000010817 I 0.858
TCF12 Vicugna pacos ENSVPAG00000006545 I 0.858
ENSXMAG00000014303 Xiphophorus maculatus ENSXMAG00000014303 I 0.858
tetur02g08700 Tetranychus urticae tetur02g08700 I 0.858
Aan_R011985 Calypte anna Aan_R011985 I 0.858
Afo_R014990 Aptenodytes forsteri Afo_R014990 I 0.858
Alligator_sinensis_CCG017304.1 Alligator sinensis Alligator_sinensis_CCG017304.1 I 0.858
ENSBTAP00000048638-D1 Bos grunniens ENSBTAP00000048638-D1 I 0.858
ENSP00000331057 Macaca fascicularis ENSP00000331057 I 0.858
Gfo_R004309 Geospiza fortis Gfo_R004309 I 0.858
Myotis_brandtii_Tcf12_10010436 Myotis brandtii Myotis_brandtii_Tcf12_10010436 I 0.858
Ogr11405 Ophisaurus gracilis Ogr11405 I 0.858
Pvit_17395 Pogona vitticeps Pvit_17395 I 0.858
Sakowv30044282m.g Saccoglossus kowalevskii Sakowv30044282m.g I 0.858
tcf12 Xenopus tropicalis XB-GENE-5799694 I 0.858
tcf12.L Xenopus laevis XB-GENE-5799717 I 0.858
TCF4 Anolis carolinensis ENSACAG00000008863 I 0.855
ENSAMEG00000017162 Ailuropoda melanoleuca ENSAMEG00000017162 I 0.855
ENSAMXG00000009833 Astyanax mexicanus ENSAMXG00000009833 I 0.855
ENSAPLG00000011135 Anas platyrhynchos ENSAPLG00000011135 I 0.855
TCF4 Bos taurus ENSBTAG00000016462 I 0.855
TCF4 Canis familiaris ENSCAFG00000000140 I 0.855
TCF4 Choloepus hoffmanni ENSCHOG00000000331 I 0.855
TCF4 Callithrix jacchus ENSCJAG00000004038 I 0.855
ENSCSAG00000018141 Chlorocebus sabaeus ENSCSAG00000018141 I 0.855
ENSDNOG00000013859 Dasypus novemcinctus ENSDNOG00000013859 I 0.855
Tcf4 Dipodomys ordii ENSDORG00000012697 I 0.855
TCF4 Equus caballus ENSECAG00000017265 I 0.855
TCF4 Erinaceus europaeus ENSEEUG00000000134 I 0.855
TCF4 Felis catus ENSFCAG00000014682 I 0.855
TCF4 Homo sapiens ENSG00000196628 D 0.855
ENSGACG00000000628 Gasterosteus aculeatus ENSGACG00000000628 I 0.855
TCF4 Gorilla gorilla ENSGGOG00000016297 I 0.855
ENSGMOG00000015710 Gadus morhua ENSGMOG00000015710 I 0.855
ENSGMOG00000018104 Gadus morhua ENSGMOG00000018104 I 0.855
ENSLACG00000003485 Latimeria chalumnae ENSLACG00000003485 I 0.855
TCF4 Loxodonta africana ENSLAFG00000013449 I 0.855
ENSLOCG00000003538 Lepisosteus oculatus ENSLOCG00000003538 I 0.855
ENSMEUG00000003794 Macropus eugenii ENSMEUG00000003794 I 0.855
TCF4 Microcebus murinus ENSMICG00000012305 I 0.855
ENSMLUG00000012927 Myotis lucifugus ENSMLUG00000012927 I 0.855
TCF4 Macaca mulatta ENSMMUG00000012001 I 0.855
TCF4 Monodelphis domestica ENSMODG00000020455 I 0.855
ENSMPUG00000016460 Mustela putorius furo ENSMPUG00000016460 I 0.855
Tcf4 Mus musculus ENSMUSG00000053477 D 0.855
ENSNLEG00000007981 Nomascus leucogenys ENSNLEG00000007981 I 0.855
TCF4 Ornithorhynchus anatinus ENSOANG00000003082 I 0.855
ENSOARG00000005018 Ovis aries ENSOARG00000005018 I 0.855
TCF4 Oryctolagus cuniculus ENSOCUG00000002669 I 0.855
ENSOGAG00000005735 Otolemur garnettii ENSOGAG00000005735 I 0.855
ENSONIG00000012720 Oreochromis niloticus ENSONIG00000012720 I 0.855
ENSORLG00000015062 Oryzias latipes ENSORLG00000015062 I 0.855
ENSPFOG00000009937 Poecilia formosa ENSPFOG00000009937 I 0.855
ENSPMAG00000000958 Petromyzon marinus ENSPMAG00000000958 I 0.855
ENSPPYG00000009175 Pongo abelii ENSPPYG00000009175 I 0.855
ENSPSIG00000014469 Pelodiscus sinensis ENSPSIG00000014469 I 0.855
TCF4 Pan troglodytes ENSPTRG00000010040 I 0.855
TCF4 Pteropus vampyrus ENSPVAG00000002074 I 0.855
Tcf4 Rattus norvegicus ENSRNOG00000012405 I 0.855
ENSSHAG00000014955 Sarcophilus harrisii ENSSHAG00000014955 I 0.855
TCF4 Sus scrofa ENSSSCG00000004535 I 0.855
ENSSTOG00000005134 Ictidomys tridecemlineatus ENSSTOG00000005134 I 0.855
TCF4 Tupaia belangeri ENSTBEG00000015498 I 0.855
ENSTSYG00000009542 Tarsius syrichta ENSTSYG00000009542 I 0.855
TCF4 Tursiops truncatus ENSTTRG00000011542 I 0.855
ENSXMAG00000011822 Xiphophorus maculatus ENSXMAG00000011822 I 0.855
SMAR008523 Strigamia maritima SMAR008523 I 0.855
Afo_R000660 Aptenodytes forsteri Afo_R000660 I 0.855
Alligator_sinensis_CCG017823.1 Alligator sinensis Alligator_sinensis_CCG017823.1 I 0.855
Cmyd_10020160 Chelonia mydas Cmyd_10020160 I 0.855
ENSP00000381382-D1 Bos grunniens ENSP00000381382-D1 I 0.855
ENSP00000381382 Macaca fascicularis ENSP00000381382 I 0.855
Myotis_brandtii_Tcf4_10017301 Myotis brandtii Myotis_brandtii_Tcf4_10017301 I 0.855
Ogr02020 Ophisaurus gracilis Ogr02020 I 0.855
Pvit_19114 Pogona vitticeps Pvit_19114 I 0.855
tcf4 Xenopus tropicalis XB-GENE-1011628 I 0.855
tcf4.S Xenopus laevis XB-GENE-1011632 I 0.855
SMU15033380 Schmidtea mediterranea SMU15033380 N 0.849
EmuJ_000995700 Echinococcus multilocularis EmuJ_000995700 N 0.849
MCOS_0000890701 Mesocestoides corti MCOS_0000890701 N 0.849