Gorai.001G053900 (Gossypium raimondii)
Leafy

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01698 (FLO_LFY) IPR002910 Gorai.001G053900 T244790_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LFY
M02692_2.00 		Arabidopsis thaliana
YWTKRACCRSYGGTYMAWR
YWTKRACCRSYGGTYMAWR		 SELEX
Mathelier et al.(2014)
MA0590.1 		0.899 0.899
LFY
M10895_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$LFY_Q2 		0.899 0.899
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.001G053900.1 Leafy 1 388
Gorai.001G053900.2 Leafy 1 385

Links

Other Leafy family TFs
Other Gossypium raimondii TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALNC14_098180 Albugo laibachii ALNC14_098180 N 0.000
ALNC14_114790 Albugo laibachii ALNC14_114790 N 0.000
estExt_fgenesh1_kg.C_260006 Phytophthora capsici estExt_fgenesh1_kg.C_260006 N 0.000
F443_03220 Phytophthora parasitica F443_03220 N 0.000
F443_03223 Phytophthora parasitica F443_03223 N 0.000
fgenesh1_pg.C_scaffold_26000008 Phytophthora capsici fgenesh1_pg.C_scaffold_26000008 N 0.000
fgenesh_masked-pir_contig_142-abinit-gene-0.47 Pythium irregulare fgenesh_masked-pir_contig_142-abinit-gene-0.47 N 0.000
fgenesh_scip_prom.28083.12017 Phytophthora lateralis fgenesh_scip_prom.28083.12017 N 0.000
fgenesh_scip_prom.28083.12018 Phytophthora lateralis fgenesh_scip_prom.28083.12018 N 0.000
fgenesh_scip_prom.46568.8839 Phytophthora kernoviae fgenesh_scip_prom.46568.8839 N 0.000
HpaG811475 Hyaloperonospora arabidopsidis HpaG811475 N 0.000
maker-pag1_scaffold_151-fgenesh-gene-0.9 Pythium aphanidermatum maker-pag1_scaffold_151-fgenesh-gene-0.9 N 0.000
maker-par_contig_173-fgenesh-gene-0.4 Pythium arrhenomanes maker-par_contig_173-fgenesh-gene-0.4 N 0.000
maker-pir_contig_142-fgenesh-gene-0.5 Pythium irregulare maker-pir_contig_142-fgenesh-gene-0.5 N 0.000
maker-piw_contig_3307-fgenesh-gene-0.0 Pythium iwayamai maker-piw_contig_3307-fgenesh-gene-0.0 N 0.000
maker-piw_contig_3307-fgenesh-gene-0.1 Pythium iwayamai maker-piw_contig_3307-fgenesh-gene-0.1 N 0.000
maker-pve_contig_603-fgenesh-gene-0.5 Pythium vexans maker-pve_contig_603-fgenesh-gene-0.5 N 0.000
maker-pve_contig_603-snap-gene-0.9 Pythium vexans maker-pve_contig_603-snap-gene-0.9 N 0.000
Phyra73305 Phytophthora ramorum Phyra73305 N 0.000
Phyra73306 Phytophthora ramorum Phyra73306 N 0.000
Physo131312 Phytophthora sojae Physo131312 N 0.000
Physo131313 Phytophthora sojae Physo131313 N 0.000
PITG_11731 Phytophthora infestans PITG_11731 N 0.000
PITG_19362 Phytophthora infestans PITG_19362 N 0.000
PYU1_G003104 Pythium ultimum PYU1_G003104 N 0.000
PYU1_G003105 Pythium ultimum PYU1_G003105 N 0.000