F775_33210 (Aegilops tauschii)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 F775_33210 T245141_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD6
M06955_2.00 		Arabidopsis thaliana
CGSCGGNDDHDRCGGMGRHDN
NHDYCKCCGYHDHHNCCGSCG		 Dap-seq
OMalley et al.(2016)
AS2_col_a 		0.836 0.836
LOB
M06966_2.00 		Arabidopsis thaliana
NVCGGCGGHRRHDRMGGMGGH
DCCKCCKYHDYYDCCGCCGBN		 Dap-seq
OMalley et al.(2016)
LOB_col_a 		0.808 0.808
gw1.238.28.1
M02262_2.00 		Physcomitrella patens
NNNNNVNGSN
NSCNBNNNNN		 PBM
Weirauch et al.(2014)
pTH8459 		0.753 0.753
LBD4
M02261_2.00 		Arabidopsis thaliana
VDNVCGSNNN
NNNSCGBNHB		 PBM
Weirauch et al.(2014)
pTH7515 		0.726 0.726
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMT24456 LOB 7 79

Links

Other LOB family TFs
Other Aegilops tauschii TFs

334 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_06994 Capronia coronata A1O1_06994 I 0.000
ACRE_006880 Acremonium chrysogenum ACRE_006880 I 0.000
BBA_03452 Beauveria bassiana BBA_03452 I 0.000
CCM_02166 Cordyceps militaris CCM_02166 I 0.000
CFIO01_13633 Colletotrichum fioriniae CFIO01_13633 I 0.000
CGGC5_12854 Colletotrichum gloeosporioides CGGC5_12854 I 0.000
CH063_01030 Colletotrichum higginsianum CH063_01030 I 0.000
CPUR_06453 Claviceps purpurea CPUR_06453 I 0.000
estExt_fgenesh1_pg.C_sca_8_chr1_1_00138 Nectria haematococca estExt_fgenesh1_pg.C_sca_8_chr1_1_00138 I 0.000
estExt_Genewise1Plus.C_110569 Neurospora discreta estExt_Genewise1Plus.C_110569 I 0.000
estExt_Genewise1Plus.C_21651 Cryphonectria parasitica estExt_Genewise1Plus.C_21651 I 0.000
F503_00471 Ophiostoma piceae uamh F503_00471 I 0.000
FGRRES_01638 Fusarium graminearum FGRRES_01638 I 0.000
FOXG_11065 Fusarium oxysporum FOXG_11065 I 0.000
FPSE_09752 Fusarium pseudograminearum FPSE_09752 I 0.000
FVEG_09736 Fusarium verticillioides FVEG_09736 I 0.000
GGTG_04497 Gaeumannomyces graminis GGTG_04497 I 0.000
GLRG_10273 Colletotrichum graminicola GLRG_10273 I 0.000
MAC_05787 Metarhizium acridum MAC_05787 I 0.000
MAJ_07700 Metarhizium majus MAJ_07700 I 0.000
MAM_06565 Metarhizium album MAM_06565 I 0.000
MANI_019125 Metarhizium anisopliae MANI_019125 I 0.000
MAPG_08463 Magnaporthe poae MAPG_08463 I 0.000
MBR_06676 Metarhizium brunneum MBR_06676 I 0.000
MGU_09148 Metarhizium guizhouense MGU_09148 I 0.000
MYCTH_2312830 Myceliophthora thermophila MYCTH_2312830 I 0.000
NCU05411 Neurospora crassa NCU05411 D 0.000
NechaG98518 Fusarium solani NechaG98518 I 0.000
NEUTE1DRAFT_102079 Neurospora tetrasperma NEUTE1DRAFT_102079 I 0.000
SMAC_04150 Sordaria macrospora SMAC_04150 I 0.000
THITE_2124588 Thielavia terrestris THITE_2124588 I 0.000
TRIATDRAFT_290379 Trichoderma atroviride TRIATDRAFT_290379 I 0.000
TRIREDRAFT_70071 Trichoderma reesei TRIREDRAFT_70071 I 0.000
TRIVIDRAFT_163322 Trichoderma virens TRIVIDRAFT_163322 I 0.000
VDAG_07704 Verticillium dahliae VDAG_07704 I 0.000
VHEMI01959 Torrubiella hemipterigena VHEMI01959 I 0.000
X797_008956 Metarhizium robertsii X797_008956 I 0.000