cassava41267.m1 (Manihot esculenta)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 cassava41267.m1 T246479_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava41267.m1 LOB 11 109

Links

Other LOB family TFs
Other Manihot esculenta TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29814.m000742 Ricinus communis 29814.m000742 N 0.949
Aquca_045_00193 Aquilegia coerulea Aquca_045_00193 N 0.707
LBD21 Arabidopsis thaliana AT3G11090 N 0.798
Bo5g136860 Brassica oleracea Bo5g136860 N 0.768
Bostr.19424s1045 Boechera stricta Bostr.19424s1045 N 0.798
Bra034867 Brassica rapa Bra034867 N 0.768
Cagra.1655s0059 Capsella grandiflora Cagra.1655s0059 N 0.798
Carubv10015898m.g Capsella rubella Carubv10015898m.g N 0.798
cassava20837.m1 Manihot esculenta cassava20837.m1 N 0.939
Ca_12464 Cicer arietinum Ca_12464 N 0.899
chr6.LjB02K20.190.nd Lotus japonicus chr6.LjB02K20.190.nd N 0.889
Ciclev10032862m.g Citrus clementina Ciclev10032862m.g N 0.939
Cucsa.136740 Cucumis sativus Cucsa.136740 N 0.899
Eucgr.G03078 Eucalyptus grandis Eucgr.G03078 N 0.919
evm.TU.supercontig_19.151 Carica papaya evm.TU.supercontig_19.151 N 0.970
LBD21 Arabidopsis lyrata fgenesh2_kg.3__1152__AT3G11090.1 N 0.798
gene21008-v1.0-hybrid Fragaria vesca gene21008-v1.0-hybrid N 0.889
GLYMA02G43220 Glycine max GLYMA02G43220 N 0.949
GLYMA11G35500 Glycine max GLYMA11G35500 N 0.929
GLYMA14G06270 Glycine max GLYMA14G06270 N 0.949
GLYMA18G02910 Glycine max GLYMA18G02910 N 0.939
Gorai.011G291500 Gossypium raimondii Gorai.011G291500 N 0.919
Gorai.013G016900 Gossypium raimondii Gorai.013G016900 N 0.909
Lus10028986.g Linum usitatissimum Lus10028986.g N 0.949
MDP0000220708 Malus domestica MDP0000220708 N 0.879
MDP0000943252 Malus domestica MDP0000943252 N 0.869
mgf019866m Mimulus guttatus mgf019866m N 0.869
MTR_3g071420 Medicago truncatula MTR_3g071420 N 0.848
MTR_5g083010 Medicago truncatula MTR_5g083010 N 0.929
orange1.1g036565m.g Citrus sinensis orange1.1g036565m.g N 0.939
PGSC0003DMG400027718 Solanum tuberosum PGSC0003DMG400027718 N 0.828
PK29334.1 Cannabis sativa PK29334.1 I 0.969
Pm018957 Prunus mume Pm018957 N 0.909
POPTR_0008s07150 Populus trichocarpa POPTR_0008s07150 N 0.949
POPTR_0010s19340 Populus trichocarpa POPTR_0010s19340 N 0.970
PRUPE_ppa012284mg Prunus persica PRUPE_ppa012284mg N 0.909
SapurV1A.0061s0510 Salix purpurea SapurV1A.0061s0510 N 0.949
SapurV1A.0650s0120 Salix purpurea SapurV1A.0650s0120 N 0.919
Solyc03g095940.1 Solanum lycopersicum Solyc03g095940.1 N 0.828
TCM_042466 Theobroma cacao TCM_042466 N 0.919
Thhalv10021674m.g Eutrema salsugineum Thhalv10021674m.g N 0.798
LBD21 Vitis vinifera VIT_13s0067g01450 N 0.970