Carubv10027507m.g (Capsella rubella)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Carubv10027507m.g T246791_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10027507m LOB 2 104

Links

Other LOB family TFs
Other Capsella rubella TFs

225 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00030p00014690 Amborella trichopoda AMTR_s00030p00014690 I 0.000
Aquca_023_00109 Aquilegia coerulea Aquca_023_00109 I 0.000
BGIOSGA034853 Oryza indica BGIOSGA034853 N 0.000
BGIOSGA037037 Oryza indica BGIOSGA037037 I 0.000
BRADI4G24937 Brachypodium distachyon BRADI4G24937 I 0.000
BRADI4G41890 Brachypodium distachyon BRADI4G41890 I 0.000
Ciclev10001715m.g Citrus clementina Ciclev10001715m.g I 0.000
Cla014037 Citrullus lanatus Cla014037 I 0.000
Cla015261 Citrullus lanatus Cla015261 I 0.000
Cucsa.363640 Cucumis sativus Cucsa.363640 I 0.000
Eucgr.F02715 Eucalyptus grandis Eucgr.F02715 I 0.000
F775_08606 Aegilops tauschii F775_08606 I 0.000
Gorai.009G285000 Gossypium raimondii Gorai.009G285000 I 0.000
GRMZM2G079365 Zea mays GRMZM2G079365 I 0.000
GRMZM2G136266 Zea mays GRMZM2G136266 I 0.000
GRMZM2G146020 Zea mays GRMZM2G146020 I 0.000
GRMZM5G821024 Zea mays GRMZM5G821024 I 0.000
GSMUA_Achr3G19170_001 Musa acuminata GSMUA_Achr3G19170_001 I 0.000
GSMUA_Achr6G13040_001 Musa acuminata GSMUA_Achr6G13040_001 I 0.000
GSMUA_Achr6G18130_001 Musa acuminata GSMUA_Achr6G18130_001 I 0.000
LPERR11G03390 Leersia perrieri LPERR11G03390 I 0.000
LPERR12G03530 Leersia perrieri LPERR12G03530 I 0.000
Lus10029773.g Linum usitatissimum Lus10029773.g I 0.000
Lus10042802.g Linum usitatissimum Lus10042802.g I 0.000
mgf003343m Mimulus guttatus mgf003343m I 0.000
MLOC_71198 Hordeum vulgare MLOC_71198 I 0.000
OB12G13750 Oryza brachyantha OB12G13750 I 0.000
OBART11G03920 Oryza barthii OBART11G03920 I 0.000
OBART12G03760 Oryza barthii OBART12G03760 I 0.000
OGLUM11G03630 Oryza glumaepatula OGLUM11G03630 N 0.000
OGLUM12G04480 Oryza glumaepatula OGLUM12G04480 I 0.000
OLONG_001598 Oryza longistaminata OLONG_001598 I 0.000
OMERI11G03570 Oryza meridionalis OMERI11G03570 N 0.000
OMERI12G02030 Oryza meridionalis OMERI12G02030 I 0.000
ONIVA11G04030 Oryza nivara ONIVA11G04030 I 0.000
ONIVA12G03450 Oryza nivara ONIVA12G03450 I 0.000
OPUNC11G03640 Oryza punctata OPUNC11G03640 N 0.000
orange1.1g019163m.g Citrus sinensis orange1.1g019163m.g I 0.000
ORGLA11G0036500 Oryza glaberrima ORGLA11G0036500 I 0.000
ORGLA12G0036800 Oryza glaberrima ORGLA12G0036800 I 0.000
ORUFI11G03840 Oryza rufipogon ORUFI11G03840 I 0.000
ORUFI12G04380 Oryza rufipogon ORUFI12G04380 I 0.000
OS11G0160500 Oryza sativa OS11G0160500 N 0.000
OS12G0162500 Oryza sativa OS12G0162500 I 0.000
Pavir.Ca00211 Panicum virgatum Pavir.Ca00211 I 0.000
Pavir.Cb01934 Panicum virgatum Pavir.Cb01934 N 0.000
Pavir.Ha01827 Panicum virgatum Pavir.Ha01827 I 0.000
Pavir.Hb01916 Panicum virgatum Pavir.Hb01916 I 0.000
PK27109.1 Cannabis sativa PK27109.1 D 0.000
POPTR_0005s21300 Populus trichocarpa POPTR_0005s21300 I 0.000
SapurV1A.0066s0110 Salix purpurea SapurV1A.0066s0110 I 0.000
SapurV1A.0256s0010 Salix purpurea SapurV1A.0256s0010 I 0.000
SapurV1A.1302s0050 Salix purpurea SapurV1A.1302s0050 I 0.000
Sb05g003810 Sorghum bicolor Sb05g003810 I 0.000
Sb08g003940 Sorghum bicolor Sb08g003940 I 0.000
Si010549m.g Setaria italica Si010549m.g I 0.000
Si026605m.g Setaria italica Si026605m.g I 0.000
Traes_4AL_273ACCFFD Triticum aestivum Traes_4AL_273ACCFFD I 0.000
Traes_4BS_ED206A2BB Triticum aestivum Traes_4BS_ED206A2BB I 0.000
Traes_4DS_FE97492F2 Triticum aestivum Traes_4DS_FE97492F2 I 0.000
Traes_5AL_538EC4C86 Triticum aestivum Traes_5AL_538EC4C86 I 0.000
Traes_5BL_4700CC358 Triticum aestivum Traes_5BL_4700CC358 N 0.000
Traes_5DL_841444545 Triticum aestivum Traes_5DL_841444545 I 0.000
TRIUR3_12877 Triticum urartu TRIUR3_12877 I 0.000
TRIUR3_31416 Triticum urartu TRIUR3_31416 I 0.000
VIP1 Vitis vinifera VIT_18s0076g00330 I 0.000