MLOC_74813 (Hordeum vulgare)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 MLOC_74813 T249450_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT-GTL1
M06968_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_col_a 		0.881 0.698
PK15172.1
M01263_2.00 		Cannabis sativa
NNNGTWAHWN
NWDTWACNNN		 PBM
Lambert et al.(2019)
pTH10125 		0.927 0.708
AT-GTL1
M06969_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_colamp_a 		0.881 0.698
OS02G0104500
M02271_2.00 		Oryza sativa
NDGTAAWWHN
NDWWTTACHN		 PBM
Weirauch et al.(2014)
pTH8719 		0.841 0.597
OS02G0104500
M02272_2.00 		Oryza sativa
NDGTAAWWHN
NDWWTTACHN		 PBM
Weirauch et al.(2014)
pTH9273 		0.841 0.597
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_74813.1 MADF 1 70
MLOC_74813.1 MADF 270 344
MLOC_74813.2 MADF 1 70
MLOC_74813.2 MADF 270 344
MLOC_74813.3 Myb 1 60
MLOC_74813.4 MADF 190 264

Links

Other MADF family TFs
Other Hordeum vulgare TFs

240 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG16280 Caenorhabditis briggsae CBG16280 N 0.000
LLOJ009706 Lutzomyia longipalpis LLOJ009706 N 0.000
RSKR_0001081900 Rhabditophanes kr3021 RSKR_0001081900 N 0.000