TCM_029695 (Theobroma cacao)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 TCM_029695 T249944_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G58630
M06976_2.00 		Arabidopsis thaliana
HNTCGCCGGARWHDN
NHDWYTCCGGCGAND		 Dap-seq
OMalley et al.(2016)
AT3G58630_col_a 		0.903 0.681
AT3G58630
M06977_2.00 		Arabidopsis thaliana
NNTCGCCGGARWHDN
NHDWYTCCGGCGANN		 Dap-seq
OMalley et al.(2016)
AT3G58630_colamp_a 		0.903 0.681
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY27995 MADF 44 124
EOY27996 MADF 44 124

Links

Other MADF family TFs
Other Theobroma cacao TFs

77 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29738.m001046 Ricinus communis 29738.m001046 I
29917.m002016 Ricinus communis 29917.m002016 I
anac044 Arabidopsis lyrata Al_scaffold_0003_51 N
anac085 Arabidopsis lyrata Al_scaffold_0006_1351 I
ANAC073 Arabidopsis lyrata Al_scaffold_0007_1273 I
Aquca_054_00006 Aquilegia coerulea Aquca_054_00006 I
SOG1 Arabidopsis thaliana AT1G25580 I
anac044 Arabidopsis thaliana AT3G01600 N
NAC073 Arabidopsis thaliana AT4G28500 D
anac085 Arabidopsis thaliana AT5G14490 I
Bo1g017410 Brassica oleracea Bo1g017410 I
Bostr.12659s0396 Boechera stricta Bostr.12659s0396 I
Bostr.1460s0050 Boechera stricta Bostr.1460s0050 N
Bostr.2902s0186 Boechera stricta Bostr.2902s0186 I
Bra001000 Brassica rapa Bra001000 N
Bra006257 Brassica rapa Bra006257 I
Bra011034 Brassica rapa Bra011034 I
Bra024197 Brassica rapa Bra024197 I
Cagra.11546s0003 Capsella grandiflora Cagra.11546s0003 I
Cagra.1225s0041 Capsella grandiflora Cagra.1225s0041 I
Cagra.1561s0026 Capsella grandiflora Cagra.1561s0026 N
Cagra.3166s0054 Capsella grandiflora Cagra.3166s0054 I
Carubv10002665m.g Capsella rubella Carubv10002665m.g I
Carubv10005324m.g Capsella rubella Carubv10005324m.g I
Carubv10009087m.g Capsella rubella Carubv10009087m.g I
Carubv10014004m.g Capsella rubella Carubv10014004m.g N
cassava12330.valid.m1 Manihot esculenta cassava12330.valid.m1 I
cassava14633.m1 Manihot esculenta cassava14633.m1 I
cassava3690.m1 Manihot esculenta cassava3690.m1 I
chr2.CM0749.410.nc Lotus japonicus chr2.CM0749.410.nc I
Ciclev10015507m.g Citrus clementina Ciclev10015507m.g I
Ciclev10031598m.g Citrus clementina Ciclev10031598m.g I
Cla004701 Citrullus lanatus Cla004701 I
Cla020673 Citrullus lanatus Cla020673 I
Cucsa.011210 Cucumis sativus Cucsa.011210 I
Cucsa.283900 Cucumis sativus Cucsa.283900 I
Eucgr.D00591 Eucalyptus grandis Eucgr.D00591 I
Eucgr.J02254 Eucalyptus grandis Eucgr.J02254 I
gene03875-v1.0-hybrid Fragaria vesca gene03875-v1.0-hybrid I
GLYMA01G22510 Glycine max GLYMA01G22510 I
GLYMA02G11140 Glycine max GLYMA02G11140 I
GLYMA16G07501 Glycine max GLYMA16G07501 N
GLYMA19G08510 Glycine max GLYMA19G08510 N
GLYMA20G32690 Glycine max GLYMA20G32690 I
Gorai.006G034600 Gossypium raimondii Gorai.006G034600 I
Gorai.007G075300 Gossypium raimondii Gorai.007G075300 I
Gorai.008G186300 Gossypium raimondii Gorai.008G186300 I
GSMUA_Achr3G07330_001 Musa acuminata GSMUA_Achr3G07330_001 I
Lus10003668.g Linum usitatissimum Lus10003668.g N
Lus10021708.g Linum usitatissimum Lus10021708.g I
mgf012882m Mimulus guttatus mgf012882m I
mgf018486m Mimulus guttatus mgf018486m I
MTR_1g093670 Medicago truncatula MTR_1g093670 I
MTR_1g093680 Medicago truncatula MTR_1g093680 I
MTR_5g053430 Medicago truncatula MTR_5g053430 I
MTR_7g033320 Medicago truncatula MTR_7g033320 I
orange1.1g014310m.g Citrus sinensis orange1.1g014310m.g I
Pavir.Da01643 Panicum virgatum Pavir.Da01643 I
PDK_20s1306131g001 Phoenix dactylifera PDK_20s1306131g001 I
PGSC0003DMG400000809 Solanum tuberosum PGSC0003DMG400000809 I
PK17141.1 Cannabis sativa PK17141.1 I
PK25812.1 Cannabis sativa PK25812.1 I
Pm015625 Prunus mume Pm015625 I
Pm029010 Prunus mume Pm029010 I
POPTR_0001s35490 Populus trichocarpa POPTR_0001s35490 I
POPTR_0008s11550 Populus trichocarpa POPTR_0008s11550 I
POPTR_0010s13980 Populus trichocarpa POPTR_0010s13980 I
PRUPE_ppa005648mg Prunus persica PRUPE_ppa005648mg I
PRUPE_ppa006948mg Prunus persica PRUPE_ppa006948mg I
SapurV1A.0079s0500 Salix purpurea SapurV1A.0079s0500 I
SapurV1A.0304s0050 Salix purpurea SapurV1A.0304s0050 I
SapurV1A.0716s0010 Salix purpurea SapurV1A.0716s0010 I
SapurV1A.1388s0020 Salix purpurea SapurV1A.1388s0020 I
SapurV1A.2846s0020 Salix purpurea SapurV1A.2846s0020 I
SOG1 Arabidopsis lyrata scaffold_102939.1 I
TCM_011869 Theobroma cacao TCM_011869 I
TCM_016984 Theobroma cacao TCM_016984 I
Thhalv10007551m.g Eutrema salsugineum Thhalv10007551m.g I
Thhalv10015728m.g Eutrema salsugineum Thhalv10015728m.g N
Thhalv10022099m.g Eutrema salsugineum Thhalv10022099m.g N
Thhalv10025819m.g Eutrema salsugineum Thhalv10025819m.g I
SOG1 Vitis vinifera VIT_01s0011g02990 I
VIT_14s0066g00360 Vitis vinifera VIT_14s0066g00360 I