HCOI02134900 (Haemonchus contortus)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 HCOI02134900 T252034_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
madf-5
M02276_2.00 		Caenorhabditis elegans
NNDCCGGHNN
NNDCCGGHNN		 PBM
Weirauch et al.(2014)
pTH9076 		0.844 0.747
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HCOI02134900.t1 MADF 65 147

Links

Other MADF family TFs
Other Haemonchus contortus TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0000281001 Angiostrongylus cantonensis ACAC_0000281001 I 0.944
ANCCAN_12875 Ancylostoma caninum ANCCAN_12875 I 0.961
CBG20858 Caenorhabditis briggsae CBG20858 I 0.843
CBN17510 Caenorhabditis brenneri CBN17510 I 0.844
CBN31453 Caenorhabditis brenneri CBN31453 I 0.844
CGOC_0000285301 Cylicostephanus goldi CGOC_0000285301 I 0.959
CJA18506 Caenorhabditis japonica CJA18506 I 0.844
CRE26355 Caenorhabditis remanei CRE26355 I 0.844
DICVIV_11545 Dictyocaulus viviparus DICVIV_11545 I 0.951
HPLM_0001751701 Haemonchus placei HPLM_0001751701 I 0.971
NECAME_12942 Necator americanus NECAME_12942 I 0.961
OESDEN_17669 Oesophagostomum dentatum OESDEN_17669 I 0.957
OESDEN_24138 Oesophagostomum dentatum OESDEN_24138 I 0.948
PTRK_0000042600 Parastrongyloides trichosuri PTRK_0000042600 N 0.818
RSKR_0000405100 Rhabditophanes kr3021 RSKR_0000405100 N 0.818
SVUK_0001242901 Strongylus vulgaris SVUK_0001242901 I 0.961
TELCIR_10199 Teladorsagia circumcincta TELCIR_10199 I 0.968
madf-5 Caenorhabditis elegans WBGene00007242 D 0.844