CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MhA1_Contig800.frz3.gene8
(
Meloidogyne hapla
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
IPR006578
MhA1_Contig800.frz3.gene8
T252301_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MhA1_Contig800.frz3.gene8
MADF
19
99
LINEVKAHPQLYNQQHRVCTDNGERNVIWEVIAQRIDETVNGEFAKKRWLQMRDRYRKELKMALRTSVQPKWPYFAKLSWL
Links
Other
MADF
family TFs
Other
Meloidogyne hapla
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BXY_0272200
Bursaphelenchus xylophilus
BXY_0272200
N
0.912
genemark-nMf.1.1.scaf07203-processed-gene-0.2
Meloidogyne floridensis
genemark-nMf.1.1.scaf07203-processed-gene-0.2
N
0.971
GPLIN_000491400
Globodera pallida
GPLIN_000491400
N
0.929
Minc10867
Meloidogyne incognita
Minc10867
N
0.971
PTRK_0000042600
Parastrongyloides trichosuri
PTRK_0000042600
N
0.818
RSKR_0000405100
Rhabditophanes kr3021
RSKR_0000405100
N
0.855
SPAL_0000254800
Strongyloides papillosus
SPAL_0000254800
N
0.818
SSTP_0000526000
Strongyloides stercoralis
SSTP_0000526000
N
0.818
SVE_0255600
Strongyloides venezuelensis
SVE_0255600
N
0.818