MAF4 (Arabidopsis lyrata)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Al_scaffold_0008_3055 T252791_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FLC
M06990_2.00 		Arabidopsis thaliana
WWDMYNDWWWWGGAAASW
WSTTTCCWWWWHNRKHWW		 Dap-seq
OMalley et al.(2016)
AGL25_col_a 		0.792 0.792
FLC
M06991_2.00 		Arabidopsis thaliana
WCYHAAAAWGGAAAS
STTTCCWTTTTDRGW		 Dap-seq
OMalley et al.(2016)
AGL25_colamp_a 		0.792 0.792
FLC
M08147_2.00 		Arabidopsis thaliana
NNWWDCYVAAAWWRGAAAVHH
DDBTTTCYWWTTTBRGHWWNN		 ChIP-seq
Mathelier et al.(2014)
MA0558.1 		0.792 0.792
AGL27
M08145_2.00 		Arabidopsis thaliana
MCMAAAATRGAAAB
VTTTCYATTTTKGK		 ChIP-seq
Mathelier et al.(2014)
MA1012.1 		0.771 0.771
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Al_scaffold_0008_3055 MADS box 10 57

Links

Other MADS box family TFs
Other Arabidopsis lyrata TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_06327 Capronia coronata A1O1_06327 I 0.000
A1O3_09986 Capronia epimyces A1O3_09986 I 0.000
A1O5_05497 Cladophialophora psammophila A1O5_05497 I 0.000
A1O5_13042 Cladophialophora psammophila A1O5_13042 I 0.000
A1O7_06104 Cladophialophora yegresii A1O7_06104 I 0.000
A1O9_08028 Exophiala aquamarina A1O9_08028 I 0.000
AACERI_AaceriAAR026W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAR026W I 0.000
AB07429.1 Alternaria brassicicola AB07429.1 I 0.000
AGOS_AAR026W Ashbya gossypii AGOS_AAR026W I 0.000
AMAG_06979 Allomyces macrogynus AMAG_06979 I 0.000
AOL_s00076g682 Arthrobotrys oligospora AOL_s00076g682 I 0.000
ARB_03691 Arthroderma benhamiae ARB_03691 I 0.000
aug-scaffold_2.g772 Neurospora discreta aug-scaffold_2.g772 I 0.000
BATDEDRAFT_7482 Batrachochytrium dendrobatidis BATDEDRAFT_7482 I 0.000
BATDEDRAFT_7668 Batrachochytrium dendrobatidis BATDEDRAFT_7668 I 0.000
BAUCODRAFT_126300 Baudoinia compniacensis BAUCODRAFT_126300 N 0.000
BAUCODRAFT_67524 Baudoinia compniacensis BAUCODRAFT_67524 I 0.000
BDDG_02210 Blastomyces dermatitidis BDDG_02210 I 0.000
BN946_scf184829.g29 Trametes cinnabarina BN946_scf184829.g29 I 0.000
BN946_scf184994.g56 Trametes cinnabarina BN946_scf184994.g56 I 0.000
BOTBODRAFT_114819 Botryobasidium botryosum BOTBODRAFT_114819 I 0.000
ACLA_051410 Aspergillus clavatus CADACLAG00004834 I 0.000
AFUA_4G12410 Aspergillus fumigatus CADAFUAG00008054 I 0.000
CADANGAG00000780 Aspergillus niger CADANGAG00000780 I 0.000
ANIA_03667 Aspergillus nidulans CADANIAG00005066 I 0.000
NFIA_031140 Neosartorya fischeri CADNFIAG00002745 I 0.000
NFIA_103860 Neosartorya fischeri CADNFIAG00010220 I 0.000
CC1G_00255 Coprinopsis cinerea CC1G_00255 I 0.000
CFIO01_08136 Colletotrichum fioriniae CFIO01_08136 I 0.000
CGGC5_15243 Colletotrichum gloeosporioides CGGC5_15243 I 0.000
CH063_07887 Colletotrichum higginsianum CH063_07887 I 0.000
CHGG_02745 Chaetomium globosum CHGG_02745 I 0.000
CIMG_07042 Coccidioides immitis CIMG_07042 I 0.000
CMQ_6002 Grosmannia clavigera CMQ_6002 I 0.000
Cob_07979 Colletotrichum orbiculare Cob_07979 I 0.000
COCC4DRAFT_128466 Bipolaris maydis COCC4DRAFT_128466 I 0.000
COCCADRAFT_94527 Bipolaris zeicola COCCADRAFT_94527 I 0.000
COCMIDRAFT_89918 Bipolaris oryzae COCMIDRAFT_89918 I 0.000
COCSADRAFT_234458 Bipolaris sorokiniana COCSADRAFT_234458 I 0.000
COCVIDRAFT_36811 Bipolaris victoriae COCVIDRAFT_36811 I 0.000
CPC735_033930 Coccidioides posadasii CPC735_033930 I 0.000
CSUB01_02050 Colletotrichum sublineola CSUB01_02050 I 0.000
CSUB01_06308 Colletotrichum sublineola CSUB01_06308 I 0.000
CTHT_0010110 Chaetomium thermophilum CTHT_0010110 I 0.000
CY34DRAFT_797588 Suillus luteus CY34DRAFT_797588 I 0.000
DICSQDRAFT_32143 Dichomitus squalens DICSQDRAFT_32143 I 0.000
DOTSEDRAFT_49782 Dothistroma septosporum DOTSEDRAFT_49782 I 0.000
DRE_01366 Drechslerella stenobrocha DRE_01366 I 0.000
E5Q_05542 Mixia osmundae E5Q_05542 I 0.000
Ecym_1257 Eremothecium cymbalariae Ecym_1257 I 0.000
EPUS_08057 Endocarpon pusillum EPUS_08057 I 0.000
estExt_fgenesh1_pg.C_40373 Cryphonectria parasitica estExt_fgenesh1_pg.C_40373 I 0.000
estExt_fgenesh1_pg.C_60282 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_60282 I 0.000
EURHEDRAFT_505813 Aspergillus ruber EURHEDRAFT_505813 I 0.000
F503_06238 Ophiostoma piceae uamh F503_06238 I 0.000
FFUJ_05685 Fusarium fujikuroi FFUJ_05685 I 0.000
fgenesh1_pg.00676_#_1 Aspergillus carbonarius fgenesh1_pg.00676_#_1 I 0.000
fgenesh1_pg.C_scaffold_14000043 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_14000043 I 0.000
fgenesh1_pg.scaffold_35000054 Monosiga brevicollis fgenesh1_pg.scaffold_35000054 I 0.000
fgenesh1_pg.sca_1_chr1_3_0000013 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0000013 I 0.000
fgeneshMC_pg.3_#_1116 Mucor circinelloides fgeneshMC_pg.3_#_1116 I 0.000
fgeneshMC_pg.3_#_188 Mucor circinelloides fgeneshMC_pg.3_#_188 I 0.000
FGRRES_08893 Fusarium graminearum FGRRES_08893 I 0.000
FIBRA_02642 Fibroporia radiculosa FIBRA_02642 I 0.000
FOMPIDRAFT_1121239 Fomitopsis pinicola FOMPIDRAFT_1121239 N 0.000
G647_06434 Cladophialophora carrionii G647_06434 I 0.000
GLOINDRAFT_204670 Rhizophagus irregularis GLOINDRAFT_204670 I 0.000
GLOINDRAFT_336169 Rhizophagus irregularis GLOINDRAFT_336169 N 0.000
GLOINDRAFT_342443 Rhizophagus irregularis GLOINDRAFT_342443 N 0.000
GLOINDRAFT_44046 Rhizophagus irregularis GLOINDRAFT_44046 I 0.000
GLOINDRAFT_44333 Rhizophagus irregularis GLOINDRAFT_44333 I 0.000
GLOINDRAFT_49297 Rhizophagus irregularis GLOINDRAFT_49297 I 0.000
GLOINDRAFT_50485 Rhizophagus irregularis GLOINDRAFT_50485 I 0.000
GLOINDRAFT_55507 Rhizophagus irregularis GLOINDRAFT_55507 N 0.000
GLOINDRAFT_60750 Rhizophagus irregularis GLOINDRAFT_60750 I 0.000
GLOINDRAFT_61497 Rhizophagus irregularis GLOINDRAFT_61497 I 0.000
GLOINDRAFT_75094 Rhizophagus irregularis GLOINDRAFT_75094 I 0.000
GLOINDRAFT_81724 Rhizophagus irregularis GLOINDRAFT_81724 I 0.000
GLOTRDRAFT_127199 Gloeophyllum trabeum GLOTRDRAFT_127199 N 0.000
GLOTRDRAFT_28355 Gloeophyllum trabeum GLOTRDRAFT_28355 I 0.000
GLRG_03847 Colletotrichum graminicola GLRG_03847 I 0.000
GLRG_04643 Colletotrichum graminicola GLRG_04643 I 0.000
GMDG_00488 Pseudogymnoascus destructans GMDG_00488 I 0.000
GSTUM_00000587001 Tuber melanosporum GSTUM_00000587001 I 0.000
gw1.1.1214.1 Heterobasidion annosum gw1.1.1214.1 I 0.000
gw1.1.1805.1 Mycosphaerella graminicola gw1.1.1805.1 I 0.000
gw1.2.1019.1 Mycosphaerella graminicola gw1.2.1019.1 I 0.000
gwh2.14.289.1 Phanerochaete chrysosporium gwh2.14.289.1 I 0.000
GYMLUDRAFT_48274 Gymnopus luxurians GYMLUDRAFT_48274 I 0.000
H072_3206 Dactylellina haptotyla H072_3206 I 0.000
H101_05516 Trichophyton interdigitale H101_05516 I 0.000
H102_00913 Trichophyton rubrum H102_00913 I 0.000
H105_00920 Trichophyton soudanense H105_00920 I 0.000
HCBG_03487 Histoplasma capsulatum HCBG_03487 I 0.000
HCBG_03538 Histoplasma capsulatum HCBG_03538 I 0.000
HETIRDRAFT_244598 Heterobasidion irregulare HETIRDRAFT_244598 I 0.000
HMPREF1120_03762 Exophiala dermatitidis HMPREF1120_03762 I 0.000
HMPREF1541_00526 Cyphellophora europaea HMPREF1541_00526 I 0.000
HMPREF1624_06196 Sporothrix schenckii HMPREF1624_06196 I 0.000
JAAARDRAFT_93880 Jaapia argillacea JAAARDRAFT_93880 I 0.000
K443DRAFT_1017 Laccaria amethystina K443DRAFT_1017 N 0.000
KAFR_0G02830 Kazachstania africana KAFR_0G02830 I 0.000
Kpol_401p4 Vanderwaltozyma polyspora Kpol_401p4 I 0.000
LACBIDRAFT_386478 Laccaria bicolor LACBIDRAFT_386478 N 0.000
LEMA_P053570.1 Leptosphaeria maculans LEMA_P053570.1 I 0.000
M422DRAFT_111122 Sphaerobolus stellatus M422DRAFT_111122 I 0.000
M422DRAFT_111323 Sphaerobolus stellatus M422DRAFT_111323 I 0.000
M422DRAFT_114792 Sphaerobolus stellatus M422DRAFT_114792 N 0.000
M422DRAFT_115248 Sphaerobolus stellatus M422DRAFT_115248 I 0.000
M422DRAFT_146751 Sphaerobolus stellatus M422DRAFT_146751 N 0.000
M422DRAFT_89155 Sphaerobolus stellatus M422DRAFT_89155 I 0.000
M422DRAFT_89750 Sphaerobolus stellatus M422DRAFT_89750 I 0.000
M422DRAFT_91926 Sphaerobolus stellatus M422DRAFT_91926 I 0.000
M437DRAFT_14409 Aureobasidium melanogenum M437DRAFT_14409 I 0.000
MCYG_01459 Microsporum canis MCYG_01459 I 0.000
MCYG_01459 Arthroderma otae MCYG_01459 I 0.000
MELLADRAFT_94219 Melampsora laricipopulina MELLADRAFT_94219 N 0.000
MGYG_04614 Microsporum gypseum MGYG_04614 I 0.000
Mycgr3G19556 Zymoseptoria tritici Mycgr3G19556 I 0.000
Mycgr3G19569 Zymoseptoria tritici Mycgr3G19569 I 0.000
MYCTH_2115094 Myceliophthora thermophila MYCTH_2115094 I 0.000
fmf-1 Neurospora crassa NCU09387 D 0.000
NechaG74402 Fusarium solani NechaG74402 I 0.000
NEUTE1DRAFT_126312 Neurospora tetrasperma NEUTE1DRAFT_126312 I 0.000
PAAG_03088 Paracoccidioides sp lutzii PAAG_03088 I 0.000
PABG_00540 Paracoccidioides brasiliensis PABG_00540 I 0.000
PAXINDRAFT_17515 Paxillus involutus PAXINDRAFT_17515 I 0.000
PAXRUDRAFT_47613 Paxillus rubicundulus PAXRUDRAFT_47613 I 0.000
Pc22g05580 Penicillium chrysogenum Pc22g05580 I 0.000
PCH_Pc22g05580 Penicillium rubens PCH_Pc22g05580 I 0.000
PDE_08506 Penicillium oxalicum PDE_08506 I 0.000
PDIP_85740 Penicillium digitatum PDIP_85740 I 0.000
PEX1_050910 Penicillium expansum PEX1_050910 I 0.000
PFICI_01201 Pestalotiopsis fici PFICI_01201 I 0.000
PITC_067750 Penicillium italicum PITC_067750 I 0.000
PLEOSDRAFT_1104604 Pleurotus ostreatus PLEOSDRAFT_1104604 I 0.000
PMAA_043500 Talaromyces marneffei PMAA_043500 I 0.000
PMAA_043500 Penicillium marneffei PMAA_043500 I 0.000
PODANS_1_13940 Podospora anserina PODANS_1_13940 I 0.000
PTRG_00506 Pyrenophora triticirepentis PTRG_00506 I 0.000
PTT_17171 Pyrenophora teres PTT_17171 I 0.000
PV05_08438 Exophiala xenobiotica PV05_08438 I 0.000
PV08_03042 Exophiala spinifera PV08_03042 I 0.000
PV09_02982 Verruconis gallopava PV09_02982 I 0.000
PV11_06959 Exophiala sideris PV11_06959 I 0.000
PVAR5_4317 Byssochlamys spectabilis PVAR5_4317 I 0.000
RHTO_08065 Rhodosporidium toruloides RHTO_08065 N 0.000
RO3G_10448 Rhizopus oryzae RO3G_10448 I 0.000
RO3G_12867 Rhizopus oryzae RO3G_12867 I 0.000
RTG_02343 Rhodotorula glutinis RTG_02343 N 0.000
S40285_08558 Stachybotrys chlorohalonata S40285_08558 I 0.000
S40288_04059 Stachybotrys chartarum S40288_04059 I 0.000
SAKL0F03872g Lachancea kluyveri SAKL0F03872g I 0.000
SAPIO_CDS6811 Scedosporium apiospermum SAPIO_CDS6811 I 0.000
SCHCODRAFT_114988 Schizophyllum commune SCHCODRAFT_114988 I 0.000
SCLCIDRAFT_6962 Scleroderma citrinum SCLCIDRAFT_6962 I 0.000
SEPMUDRAFT_160654 Sphaerulina musiva SEPMUDRAFT_160654 I 0.000
SERLA73DRAFT_18439 Serpula lacrymans SERLA73DRAFT_18439 I 0.000
SETTUDRAFT_141783 Setosphaeria turcica SETTUDRAFT_141783 I 0.000
SJAG_05153 Schizosaccharomyces japonicus SJAG_05153 I 0.000
SMAC_04250 Sordaria macrospora SMAC_04250 I 0.000
SMAC_07212 Sordaria macrospora SMAC_07212 I 0.000
SNOG_06805 Stagonospora nodorum SNOG_06805 I 0.000
SNOG_06805 Phaeosphaeria nodorum SNOG_06805 I 0.000
SOCG_02523 Schizosaccharomyces octosporus SOCG_02523 I 0.000
mat3-Mc Schizosaccharomyces pombe SPBC1711.02 I 0.000
mat1-Mc Schizosaccharomyces pombe SPBC23G7.09 D 0.000
SPBR_00669 Sporothrix brasiliensis SPBR_00669 I 0.000
mat3-Mc Schizosaccharomyces pombe SPMTR.04 I 0.000
SPPG_01987 Spizellomyces punctatus SPPG_01987 I 0.000
SPPG_05561 Spizellomyces punctatus SPPG_05561 I 0.000
TBLA_0J01680 Tetrapisispora blattae TBLA_0J01680 I 0.000
TDEL_0H02760 Torulaspora delbrueckii TDEL_0H02760 I 0.000
TESG_07204 Trichophyton tonsurans TESG_07204 I 0.000
THITE_2111506 Thielavia terrestris THITE_2111506 N 0.000
THITE_2154193 Thielavia terrestris THITE_2154193 I 0.000
TRV_02614 Trichophyton verrucosum TRV_02614 I 0.000
U727_00431750231 Penicillium solitum U727_00431750231 I 0.000
UCRNP2_4825 Neofusicoccum parvum UCRNP2_4825 I 0.000
UCRNP2_5172 Neofusicoccum parvum UCRNP2_5172 I 0.000
UREG_05828 Uncinocarpus reesii UREG_05828 I 0.000
V499_02697 Pseudogymnoascus pannorum V499_02697 I 0.000
V565_010180 Rhizoctonia solani V565_010180 I 0.000
VDAG_08843 Verticillium dahliae VDAG_08843 I 0.000
VDBG_05105 Verticillium albo atrum VDBG_05105 I 0.000
VDBG_05105 Verticillium alfalfae VDBG_05105 I 0.000
W97_06647 Coniosporium apollinis W97_06647 I 0.000
Z517_01278 Fonsecaea pedrosoi Z517_01278 I 0.000
Z518_05535 Rhinocladiella mackenziei Z518_05535 I 0.000
Z519_03613 Cladophialophora bantiana Z519_03613 I 0.000