Bo4g139560 (Brassica oleracea)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Bo4g139560 T253113_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bo4g139560.1 MADS box 20 64

Links

Other MADS box family TFs
Other Brassica oleracea TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Al_scaffold_0007_3741 Arabidopsis lyrata Al_scaffold_0007_3741 I 0.766
AGL105 Arabidopsis thaliana AT5G37415 I 0.731
AGL77 Arabidopsis thaliana AT5G38740 I 0.766
AGL81 Arabidopsis thaliana AT5G39750 I 0.766
AGL98 Arabidopsis thaliana AT5G39810 I 0.745
AGL76 Arabidopsis thaliana AT5G40120 I 0.766
AGL43 Arabidopsis thaliana AT5G40220 I 0.778
AGL75 Arabidopsis thaliana AT5G41200 I 0.795
Bo4g139260 Brassica oleracea Bo4g139260 I 0.900
Bo4g139620 Brassica oleracea Bo4g139620 N 0.909
Bo4g139640 Brassica oleracea Bo4g139640 N 1.000
Bra025607 Brassica rapa Bra025607 N 0.953
Bra025609 Brassica rapa Bra025609 I 0.851
Bra025619 Brassica rapa Bra025619 N 0.867
fgenesh2_kg.7__3412__AT5G41200.1 Arabidopsis lyrata fgenesh2_kg.7__3412__AT5G41200.1 I 0.761
scaffold_704060.1 Arabidopsis lyrata scaffold_704060.1 I 0.783
Thhalv10028184m.g Eutrema salsugineum Thhalv10028184m.g I 0.756
Thhalv10028282m.g Eutrema salsugineum Thhalv10028282m.g I 0.739