Bo4g139620 (Brassica oleracea)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Bo4g139620 T253114_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bo4g139620.1 MADS box 13 56

Links

Other MADS box family TFs
Other Brassica oleracea TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra025607 Brassica rapa Bra025607 N 0.953
Bra025619 Brassica rapa Bra025619 N 0.932
Bo4g139560 Brassica oleracea Bo4g139560 N 0.909
Bo4g139640 Brassica oleracea Bo4g139640 N 0.909
Bo4g139260 Brassica oleracea Bo4g139260 I 0.900
Bra025609 Brassica rapa Bra025609 I 0.872
Al_scaffold_0007_3741 Arabidopsis lyrata Al_scaffold_0007_3741 I 0.818
AGL77 Arabidopsis thaliana AT5G38740 I 0.818
AGL81 Arabidopsis thaliana AT5G39750 I 0.818
AGL76 Arabidopsis thaliana AT5G40120 I 0.818
AGL43 Arabidopsis thaliana AT5G40220 I 0.818
AGL75 Arabidopsis thaliana AT5G41200 I 0.818
fgenesh2_kg.7__3412__AT5G41200.1 Arabidopsis lyrata fgenesh2_kg.7__3412__AT5G41200.1 I 0.818
scaffold_704060.1 Arabidopsis lyrata scaffold_704060.1 I 0.818
Thhalv10028184m.g Eutrema salsugineum Thhalv10028184m.g I 0.773
AGL105 Arabidopsis thaliana AT5G37415 I 0.769
AGL98 Arabidopsis thaliana AT5G39810 I 0.745
Thhalv10028282m.g Eutrema salsugineum Thhalv10028282m.g I 0.739
Bostr.10058s0014 Boechera stricta Bostr.10058s0014 I 0.727