Bostr.10058s0014 (Boechera stricta)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Bostr.10058s0014 T257561_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL78
M10932_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT5G65330_01 		0.830 0.830
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.10058s0014.1.p MADS box 6 52

Links

Other MADS box family TFs
Other Boechera stricta TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29728.m000821 Ricinus communis 29728.m000821 N
Aquca_023_00033 Aquilegia coerulea Aquca_023_00033 N
BGIOSGA009486 Oryza indica BGIOSGA009486 N
Bostr.25463s0361 Boechera stricta Bostr.25463s0361 N
Cagra.1008s0003 Capsella grandiflora Cagra.1008s0003 N
Carubv10001958m.g Capsella rubella Carubv10001958m.g N
cassava25358.m1 Manihot esculenta cassava25358.m1 N
Ca_04306 Cicer arietinum Ca_04306 N
chr5.LjT08L18.190.nd Lotus japonicus chr5.LjT08L18.190.nd N
Ciclev10002467m.g Citrus clementina Ciclev10002467m.g N
Cla012103 Citrullus lanatus Cla012103 N
Cucsa.088330 Cucumis sativus Cucsa.088330 N
Eucgr.F04126 Eucalyptus grandis Eucgr.F04126 N
gene29104-v1.0-hybrid Fragaria vesca gene29104-v1.0-hybrid N
GLYMA10G36001 Glycine max GLYMA10G36001 N
GLYMA20G31580 Glycine max GLYMA20G31580 N
Gorai.005G074700 Gossypium raimondii Gorai.005G074700 N
Lus10009420.g Linum usitatissimum Lus10009420.g N
Lus10028701.g Linum usitatissimum Lus10028701.g N
MDP0000273602 Malus domestica MDP0000273602 N
MLOC_10423 Hordeum vulgare MLOC_10423 N
MTR_1g096340 Medicago truncatula MTR_1g096340 N
OBART03G40280 Oryza barthii OBART03G40280 N
OGLUM03G40150 Oryza glumaepatula OGLUM03G40150 N
OLONG_012145 Oryza longistaminata OLONG_012145 N
ONIVA03G42160 Oryza nivara ONIVA03G42160 N
OPUNC03G37470 Oryza punctata OPUNC03G37470 N
OPUNC03G37490 Oryza punctata OPUNC03G37490 N
orange1.1g028218m.g Citrus sinensis orange1.1g028218m.g N
ORGLA03G0371400 Oryza glaberrima ORGLA03G0371400 N
OS03G0838900 Oryza sativa OS03G0838900 N
Pavir.Ia00190 Panicum virgatum Pavir.Ia00190 N
Pavir.J01833 Panicum virgatum Pavir.J01833 N
PDK_20s1587811g001 Phoenix dactylifera PDK_20s1587811g001 N
PGSC0003DMG400009226 Solanum tuberosum PGSC0003DMG400009226 N
PK00213.1 Cannabis sativa PK00213.1 N
Pm022190 Prunus mume Pm022190 N
POPTR_0013s11780 Populus trichocarpa POPTR_0013s11780 N
PRUPE_ppa026991mg Prunus persica PRUPE_ppa026991mg N
SapurV1A.0179s0060 Salix purpurea SapurV1A.0179s0060 N
Sb01g001940 Sorghum bicolor Sb01g001940 N
Solyc11g017430.1 Solanum lycopersicum Solyc11g017430.1 N
TCM_036345 Theobroma cacao TCM_036345 N
Thhalv10028979m.g Eutrema salsugineum Thhalv10028979m.g N
VIT_18s0072g01130 Vitis vinifera VIT_18s0072g01130 N