Ciclev10006503m.g (Citrus clementina)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Ciclev10006503m.g T257859_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10006503m MADS box 16 63

Links

Other MADS box family TFs
Other Citrus clementina TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29842.m003592 Ricinus communis 29842.m003592 N 0.000
29842.m003644 Ricinus communis 29842.m003644 N 0.000
30086.m000210 Ricinus communis 30086.m000210 N 0.000
30169.m006531 Ricinus communis 30169.m006531 N 0.000
ETC1 Arabidopsis lyrata Al_scaffold_0001_92 N 0.000
AMTR_s00057p00119300 Amborella trichopoda AMTR_s00057p00119300 N 0.000
AMTR_s00147p00088570 Amborella trichopoda AMTR_s00147p00088570 N 0.000
Aquca_012_00145 Aquilegia coerulea Aquca_012_00145 N 0.000
ETC1 Arabidopsis thaliana AT1G01380 N 0.000
Bostr.5325s0057 Boechera stricta Bostr.5325s0057 N 0.000
Cagra.1968s0081 Capsella grandiflora Cagra.1968s0081 N 0.000
Carubv10011382m.g Capsella rubella Carubv10011382m.g N 0.000
cassava10382.m1 Manihot esculenta cassava10382.m1 N 0.000
cassava11157.m1 Manihot esculenta cassava11157.m1 N 0.000
cassava23225.valid.m1 Manihot esculenta cassava23225.valid.m1 N 0.000
cassava23226.valid.m1 Manihot esculenta cassava23226.valid.m1 N 0.000
cassava24285.valid.m1 Manihot esculenta cassava24285.valid.m1 N 0.000
cassava24286.valid.m1 Manihot esculenta cassava24286.valid.m1 N 0.000
cassava4691.m1 Manihot esculenta cassava4691.m1 N 0.000
Ca_15029 Cicer arietinum Ca_15029 N 0.000
Ciclev10017220m.g Citrus clementina Ciclev10017220m.g N 0.000
Eucgr.A01720 Eucalyptus grandis Eucgr.A01720 N 0.000
Eucgr.D01323 Eucalyptus grandis Eucgr.D01323 N 0.000
Eucgr.K00332 Eucalyptus grandis Eucgr.K00332 N 0.000
evm.TU.contig_29502 Carica papaya evm.TU.contig_29502 N 0.000
gene23919-v1.0-hybrid Fragaria vesca gene23919-v1.0-hybrid N 0.000
gene35171-v1.0-hybrid Fragaria vesca gene35171-v1.0-hybrid N 0.000
GLYMA06G45941 Glycine max GLYMA06G45941 N 0.000
GLYMA12G10790 Glycine max GLYMA12G10790 N 0.000
GLYMA12G32130 Glycine max GLYMA12G32130 N 0.000
Gorai.002G083400 Gossypium raimondii Gorai.002G083400 N 0.000
Gorai.008G172400 Gossypium raimondii Gorai.008G172400 N 0.000
Gorai.010G252300 Gossypium raimondii Gorai.010G252300 N 0.000
Gorai.010G253000 Gossypium raimondii Gorai.010G253000 N 0.000
GSMUA_Achr10G09220_001 Musa acuminata GSMUA_Achr10G09220_001 N 0.000
Lus10005949.g Linum usitatissimum Lus10005949.g N 0.000
MDP0000216918 Malus domestica MDP0000216918 N 0.000
MDP0000270078 Malus domestica MDP0000270078 N 0.000
MDP0000387366 Malus domestica MDP0000387366 N 0.000
MDP0000499190 Malus domestica MDP0000499190 N 0.000
mgf009009m Mimulus guttatus mgf009009m N 0.000
MTR_4g046737 Medicago truncatula MTR_4g046737 N 0.000
MTR_5g009460 Medicago truncatula MTR_5g009460 N 0.000
PDK_20s1307674g001 Phoenix dactylifera PDK_20s1307674g001 N 0.000
PDK_20s1335581g001 Phoenix dactylifera PDK_20s1335581g001 N 0.000
PK11198.1 Cannabis sativa PK11198.1 N 0.000
Pm009748 Prunus mume Pm009748 N 0.000
POPTR_0004s02060 Populus trichocarpa POPTR_0004s02060 N 0.000
POPTR_0007s02510 Populus trichocarpa POPTR_0007s02510 N 0.000
POPTR_0011s00390 Populus trichocarpa POPTR_0011s00390 N 0.000
POPTR_0012s01420 Populus trichocarpa POPTR_0012s01420 N 0.000
POPTR_0015s02310 Populus trichocarpa POPTR_0015s02310 N 0.000
POPTR_0017s06470 Populus trichocarpa POPTR_0017s06470 N 0.000
PRUPE_ppa014728mg Prunus persica PRUPE_ppa014728mg N 0.000
PRUPE_ppa023926mg Prunus persica PRUPE_ppa023926mg N 0.000
SapurV1A.0345s0340 Salix purpurea SapurV1A.0345s0340 N 0.000
SapurV1A.0346s0010 Salix purpurea SapurV1A.0346s0010 N 0.000
SapurV1A.0377s0050 Salix purpurea SapurV1A.0377s0050 N 0.000
SapurV1A.0722s0160 Salix purpurea SapurV1A.0722s0160 N 0.000
SapurV1A.0779s0100 Salix purpurea SapurV1A.0779s0100 N 0.000
SapurV1A.0928s0060 Salix purpurea SapurV1A.0928s0060 N 0.000
SapurV1A.1106s0040 Salix purpurea SapurV1A.1106s0040 N 0.000
SapurV1A.1227s0050 Salix purpurea SapurV1A.1227s0050 N 0.000
Solyc07g052490.2 Solanum lycopersicum Solyc07g052490.2 N 0.000
TCM_011327 Theobroma cacao TCM_011327 N 0.000
TCM_015351 Theobroma cacao TCM_015351 N 0.000
TCM_030163 Theobroma cacao TCM_030163 N 0.000
TCM_046858 Theobroma cacao TCM_046858 N 0.000
VIT_10s0116g00500 Vitis vinifera VIT_10s0116g00500 N 0.000
VIT_10s0116g01760 Vitis vinifera VIT_10s0116g01760 N 0.000
VIT_12s0059g02360 Vitis vinifera VIT_12s0059g02360 N 0.000