gene35171-v1.0-hybrid (Fragaria vesca)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gene35171-v1.0-hybrid T287429_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna35171.1-v1.0-hybrid Myb 29 71

Links

Other Myb/SANT family TFs
Other Fragaria vesca TFs

83 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0012s01420 Populus trichocarpa POPTR_0012s01420 N 0.807
SapurV1A.0346s0010 Salix purpurea SapurV1A.0346s0010 N 0.807
SapurV1A.0377s0050 Salix purpurea SapurV1A.0377s0050 N 0.807
SapurV1A.1227s0050 Salix purpurea SapurV1A.1227s0050 N 0.807
evm.TU.contig_29502 Carica papaya evm.TU.contig_29502 N 0.801
POPTR_0015s02310 Populus trichocarpa POPTR_0015s02310 N 0.786
TCM_015351 Theobroma cacao TCM_015351 N 0.786
30169.m006531 Ricinus communis 30169.m006531 N 0.780
Eucgr.K00332 Eucalyptus grandis Eucgr.K00332 N 0.764
cassava10382.m1 Manihot esculenta cassava10382.m1 N 0.758
ETC1 Arabidopsis lyrata Al_scaffold_0001_92 N 0.746
ETC1 Arabidopsis thaliana AT1G01380 N 0.746
Bostr.5325s0057 Boechera stricta Bostr.5325s0057 N 0.746
Cagra.1968s0081 Capsella grandiflora Cagra.1968s0081 N 0.746
Carubv10011382m.g Capsella rubella Carubv10011382m.g N 0.746
GLYMA01G43435 Glycine max GLYMA01G43435 N 0.722
TCM_005177 Theobroma cacao TCM_005177 N 0.712
cassava32987.m1 Manihot esculenta cassava32987.m1 N 0.712
Ciclev10024111m.g Citrus clementina Ciclev10024111m.g N 0.712
Eucgr.E00069 Eucalyptus grandis Eucgr.E00069 N 0.712
evm.TU.supercontig_3.55 Carica papaya evm.TU.supercontig_3.55 N 0.712
Gorai.007G107400 Gossypium raimondii Gorai.007G107400 N 0.712
Lus10038822.g Linum usitatissimum Lus10038822.g N 0.712
orange1.1g034546m.g Citrus sinensis orange1.1g034546m.g N 0.712
Thhalv10009233m.g Eutrema salsugineum Thhalv10009233m.g N 0.712
GLYMA11G02061 Glycine max GLYMA11G02061 N 0.710
POPTR_0002s17030 Populus trichocarpa POPTR_0002s17030 N 0.708
Cla011563 Citrullus lanatus Cla011563 N 0.708
Bo8g117860 Brassica oleracea Bo8g117860 N 0.707
Bra032635 Brassica rapa Bra032635 N 0.707
MTR_5g009460 Medicago truncatula MTR_5g009460 N 0.706
Ca_15029 Cicer arietinum Ca_15029 N 0.706
GSMUA_Achr10G09220_001 Musa acuminata GSMUA_Achr10G09220_001 N 0.705
Bra026297 Brassica rapa Bra026297 N 0.699
SapurV1A.0190s0070 Salix purpurea SapurV1A.0190s0070 N 0.699
SapurV1A.2295s0020 Salix purpurea SapurV1A.2295s0020 N 0.699
SapurV1A.2893s0010 Salix purpurea SapurV1A.2893s0010 N 0.699
Lus10005949.g Linum usitatissimum Lus10005949.g N 0.698
Ciclev10006315m.g Citrus clementina Ciclev10006315m.g N 0.697
VIT_15s0046g01130 Vitis vinifera VIT_15s0046g01130 N 0.692
PRUPE_ppa014728mg Prunus persica PRUPE_ppa014728mg N 0.691
Pm019781 Prunus mume Pm019781 N 0.690
PRUPE_ppa024794mg Prunus persica PRUPE_ppa024794mg N 0.687
GLYMA12G32130 Glycine max GLYMA12G32130 N 0.684
POPTR_0007s02510 Populus trichocarpa POPTR_0007s02510 N 0.684
POPTR_0017s06470 Populus trichocarpa POPTR_0017s06470 N 0.684
SapurV1A.0779s0100 Salix purpurea SapurV1A.0779s0100 N 0.684
SapurV1A.0928s0060 Salix purpurea SapurV1A.0928s0060 N 0.684
PRUPE_ppa023853mg Prunus persica PRUPE_ppa023853mg N 0.683
Pm018400 Prunus mume Pm018400 N 0.683
Lus10014933.g Linum usitatissimum Lus10014933.g N 0.683
MDP0000141474 Malus domestica MDP0000141474 N 0.683
Eucgr.E00851 Eucalyptus grandis Eucgr.E00851 N 0.681
VIT_16s0050g02530 Vitis vinifera VIT_16s0050g02530 N 0.679
cassava46504.m1 Manihot esculenta cassava46504.m1 N 0.678
Aquca_028_00182 Aquilegia coerulea Aquca_028_00182 N 0.678
PRUPE_ppa023926mg Prunus persica PRUPE_ppa023926mg N 0.677
TCM_016428 Theobroma cacao TCM_016428 N 0.677
Pm009748 Prunus mume Pm009748 N 0.677
MDP0000270078 Malus domestica MDP0000270078 N 0.677
MDP0000499190 Malus domestica MDP0000499190 N 0.677
Gorai.001G155700 Gossypium raimondii Gorai.001G155700 N 0.676
SapurV1A.0722s0160 Salix purpurea SapurV1A.0722s0160 N 0.676
gene19217-v1.0-hybrid Fragaria vesca gene19217-v1.0-hybrid N 0.673
MDP0000583070 Malus domestica MDP0000583070 N 0.673
Al_scaffold_0136_3 Arabidopsis lyrata Al_scaffold_0136_3 N 0.670
Cagra.0567s0009 Capsella grandiflora Cagra.0567s0009 N 0.670
Carubv10024964m.g Capsella rubella Carubv10024964m.g N 0.668
SapurV1A.0013s0580 Salix purpurea SapurV1A.0013s0580 N 0.667
ETC2 Arabidopsis thaliana AT2G30420 N 0.666
Eucgr.A01720 Eucalyptus grandis Eucgr.A01720 N 0.666
cassava24285.valid.m1 Manihot esculenta cassava24285.valid.m1 N 0.663
cassava24286.valid.m1 Manihot esculenta cassava24286.valid.m1 N 0.663
POPTR_0004s02060 Populus trichocarpa POPTR_0004s02060 N 0.662
POPTR_0011s00390 Populus trichocarpa POPTR_0011s00390 N 0.662
TCM_011327 Theobroma cacao TCM_011327 N 0.662
TCM_046858 Theobroma cacao TCM_046858 N 0.662
VIT_12s0059g02360 Vitis vinifera VIT_12s0059g02360 N 0.662
30086.m000210 Ricinus communis 30086.m000210 N 0.662
Carubv10025583m.g Capsella rubella Carubv10025583m.g N 0.662
Gorai.010G253000 Gossypium raimondii Gorai.010G253000 N 0.662
SapurV1A.0345s0340 Salix purpurea SapurV1A.0345s0340 N 0.662
SapurV1A.1106s0040 Salix purpurea SapurV1A.1106s0040 N 0.662