CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10021712m.g
(
Capsella rubella
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Carubv10021712m.g
T264663_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10021712m
mTERF
84
158
LQVLRRWGCDDDEISKLFTRRPSLQRANVSQLEFKLSLLKPLGITSSDLVKILNCRPRFFSCRIHLVLDERINYF
Carubv10021712m
mTERF
145
359
CRIHLVLDERINYFMEFLGSKEVLRKAIIRNPSLMLYDLDHKIKPAIEFYKRLGFSQQDLVAMLISRPTLIPRTNFNKEKFEYIRKTGVTRESKMFKYVAAIIGVSRMETIQEKVGNLEKFGFSEEEIWHLCGKCPILLTLSVEKVQRNMTFVIASMKLPAHSVIRHPCLLLLNLETHLKPRADLVKRVLEMRLQPLIKEVNIFRALRMSEERFL
Links
Other
mTERF
family TFs
Other
Capsella rubella
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT1G79220
Arabidopsis thaliana
AT1G79220
N
0.904
Bo6g123670
Brassica oleracea
Bo6g123670
N
0.830
Bostr.20129s0357
Boechera stricta
Bostr.20129s0357
N
0.908
Bra035100
Brassica rapa
Bra035100
N
0.809
Cagra.1361s0069
Capsella grandiflora
Cagra.1361s0069
N
0.986
fgenesh2_kg.2__2219__AT1G79220.1
Arabidopsis lyrata
fgenesh2_kg.2__2219__AT1G79220.1
N
0.929
Thhalv10019771m.g
Eutrema salsugineum
Thhalv10019771m.g
N
0.840