CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra035100
(
Brassica rapa
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
Bra035100
T262208_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra035100.1-P
mTERF
56
133
FEVLRKWGCNDDEISKLFTSRPALQRANVSQLEFKLSLLTPLGITSSDLVKIVSCRPKFFSSRIHLVLDERINYFIDV
Bra035100.1-P
mTERF
119
331
IHLVLDERINYFIDVLGSKEVLRKAIIRNPSLMLYDLDDKIKPAIEFYRGLGFSQEDLVAMLMSRPTVIPRTSFNKGKLEYIHKTGVTRDSKMFKYVAAIIGVTRMETIQEKVANLEKFGLSEDEIWGLCGKCPILLTLSVEKVQRNMTFVVATMKLAASSVLKHPFLLLANLETQIRPRVDLVTRVFEMGMKPLVEDVSIATALRMSEKRFL
Links
Other
mTERF
family TFs
Other
Brassica rapa
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo6g123670
Brassica oleracea
Bo6g123670
N
0.975
Thhalv10019771m.g
Eutrema salsugineum
Thhalv10019771m.g
N
0.820
Bostr.20129s0357
Boechera stricta
Bostr.20129s0357
N
0.816
Carubv10021712m.g
Capsella rubella
Carubv10021712m.g
N
0.809
Cagra.1361s0069
Capsella grandiflora
Cagra.1361s0069
N
0.809
fgenesh2_kg.2__2219__AT1G79220.1
Arabidopsis lyrata
fgenesh2_kg.2__2219__AT1G79220.1
N
0.806
AT1G79220
Arabidopsis thaliana
AT1G79220
N
0.749