CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.1361s0069
(
Capsella grandiflora
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Cagra.1361s0069
T264620_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.1361s0069.1.p
mTERF
84
161
LQVLRRWGCDDDEISKLFTRRPSLQRANVSQLEFKLSLLKPLGITSSDLVKILNCRPRFFSCRIHLVLDERINYFMEI
Cagra.1361s0069.1.p
mTERF
145
359
CRIHLVLDERINYFMEILGSKEVLRKAIIRNPSLMLYDLDHKIKPAIEFYKRLGFSQQDLVAMLISRPTLIPRTNFNKEKFEYIRKTGVTRESKMFKYVAAIIGVSRMETIQEKVGNLEKFGFSEEEIWHLCGKCPILLTLSVEKVQRNMTFVIASMKLPAHSVIRHPCLLLLNLETHLKPRADLVKRVLEMRLQPLIKEVNIFRALRMSEERFL
Links
Other
mTERF
family TFs
Other
Capsella grandiflora
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Carubv10021712m.g
Capsella rubella
Carubv10021712m.g
N
0.986
fgenesh2_kg.2__2219__AT1G79220.1
Arabidopsis lyrata
fgenesh2_kg.2__2219__AT1G79220.1
N
0.933
Bostr.20129s0357
Boechera stricta
Bostr.20129s0357
N
0.908
AT1G79220
Arabidopsis thaliana
AT1G79220
N
0.907
Thhalv10019771m.g
Eutrema salsugineum
Thhalv10019771m.g
N
0.839
Bo6g123670
Brassica oleracea
Bo6g123670
N
0.821
Bra035100
Brassica rapa
Bra035100
N
0.809