CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10013278m.g
(
Eutrema salsugineum
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Thhalv10013278m.g
T265192_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10013278m
mTERF
48
159
LLFSCLDRRETGLIFRCNCLSSPIECRSQMETLFSLFRAFGFREEETEMIIAKNPDVKSTSLDKIGARIASLQSLKLDGFALQGLIAKCPNLLTSEEFDLVITFLVDELEGR
Thhalv10013278m
mTERF
81
331
FSLFRAFGFREEETEMIIAKNPDVKSTSLDKIGARIASLQSLKLDGFALQGLIAKCPNLLTSEEFDLVITFLVDELEGRLEPELVERLLAVVDTSFLLSFNQKVRLLIHHGIPKEKISHVLSKVYLNKLLYQKSVEDIERLISFLEPFGGIGIIARRPVILNSDLDSQLIPRVEFIRNLSGEDDFATGTVLRRLPAILSYSVDHMNSHVEFLKSFAGLTSEQVFKIVHVFPNVISTSKERKLRPRLEFLKD
Thhalv10013278m
mTERF
318
480
KERKLRPRLEFLKDCGFDSPGIFKFLSKAPLFLALSEDNLSHKLGLLVKIGYKHRTKELAFAMGAVTRTSSDNMQRVIGLYLSYGLSFEDILAMSTKHPQVLQYNHSSLEEKLEYLIEYMGREVEELLAFPAFLGYKLDSRIKHRYEEKLKSREETSYSFLRK
Links
Other
mTERF
family TFs
Other
Eutrema salsugineum
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo9g115130
Brassica oleracea
Bo9g115130
N
0.732
Bostr.26833s0853
Boechera stricta
Bostr.26833s0853
N
0.709
Bra003005
Brassica rapa
Bra003005
N
0.713