CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10024740m.g
(
Eutrema salsugineum
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Thhalv10024740m.g
T265225_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10024739m
mTERF
117
257
RFISNLLSKIDDNHKDISRALTKYLRYNPINEFEPFFESLGLCPSEFEPLLPQQPMFLSDDGIMFENFHALCNYGIPRGKIGRVYKEAREVFRYESGMLESKLRAYEDLGLRKATVIKLVTSCPLLLVGGIDGEFACVVDK
Thhalv10024739m
mTERF
287
514
IEFLEKVGCKEEKLSSLLKTYPALVIEGSGKKFYVLFGRLFKLGLQVNEIYRLFIDNPEMLSDKCVKNIRKTLDFLVAIRMETQFIRKTLLSHMELIGTCSLQAPRTACNSLNVSQDELCQILKEDPLRLFTLVSTTTNRKSKLLSEDSRKYAEKTAFLLRLGYVENSDEMVKALKRFRGRGDQLQERFDCLVKAGLNHNVVTEMIKHAPMILNLSKDVIEKKIHSLT
Thhalv10024739m
mTERF
428
572
SKLLSEDSRKYAEKTAFLLRLGYVENSDEMVKALKRFRGRGDQLQERFDCLVKAGLNHNVVTEMIKHAPMILNLSKDVIEKKIHSLTELLGYPIESLVSFPAYLCYDMQRIHHRFSMYLWLRERDAAKPLLSPSTILTCGDARFV
Thhalv10024740m
mTERF
117
257
RFISNLLSKIDDNHKDISRALTKYLRYNPINEFEPFFESLGLCPSEFEPLLPQQPMFLSDDGIMFENFHALCNYGIPRGKIGRVYKEAREVFRYESGMLESKLRAYEDLGLRKATVIKLVTSCPLLLVGGIDGEFACVVDK
Thhalv10024740m
mTERF
287
514
IEFLEKVGCKEEKLSSLLKTYPALVIEGSGKKFYVLFGRLFKLGLQVNEIYRLFIDNPEMLSDKCVKNIRKTLDFLVAIRMETQFIRKTLLSHMELIGTCSLQAPRTACNSLNVSQDELCQILKEDPLRLFTLVSTTTNRKSKLLSEDSRKYAEKTAFLLRLGYVENSDEMVKALKRFRGRGDQLQERFDCLVKAGLNHNVVTEMIKHAPMILNLSKDVIEKKIHSLT
Thhalv10024740m
mTERF
428
572
SKLLSEDSRKYAEKTAFLLRLGYVENSDEMVKALKRFRGRGDQLQERFDCLVKAGLNHNVVTEMIKHAPMILNLSKDVIEKKIHSLTELLGYPIESLVSFPAYLCYDMQRIHHRFSMYLWLRERDAAKPLLSPSTILTCGDARFV
Links
Other
mTERF
family TFs
Other
Eutrema salsugineum
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_022_00242
Aquilegia coerulea
Aquca_022_00242
N
chr6.CM0037.1460.nc
Lotus japonicus
chr6.CM0037.1460.nc
N
Cla019852
Citrullus lanatus
Cla019852
N
Cucsa.152130
Cucumis sativus
Cucsa.152130
N
evm.TU.supercontig_139.30
Carica papaya
evm.TU.supercontig_139.30
N
gene30384-v1.0-hybrid
Fragaria vesca
gene30384-v1.0-hybrid
N
GLYMA09G11740
Glycine max
GLYMA09G11740
N
GLYMA15G23480
Glycine max
GLYMA15G23480
N
Gorai.011G047900
Gossypium raimondii
Gorai.011G047900
N
MTR_2g049780
Medicago truncatula
MTR_2g049780
N
Pm010460
Prunus mume
Pm010460
N
POPTR_0011s02560
Populus trichocarpa
POPTR_0011s02560
N
PRUPE_ppa008991mg
Prunus persica
PRUPE_ppa008991mg
N
SapurV1A.0242s0210
Salix purpurea
SapurV1A.0242s0210
N
TCM_029419
Theobroma cacao
TCM_029419
N
VIT_10s0003g04040
Vitis vinifera
VIT_10s0003g04040
N