Bo7g115810 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo7g115810 T267528_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PC-MYB1
M07110_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R1_col_a 		0.882 0.964
PC-MYB1
M07111_2.00 		Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH		 Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a 		0.882 0.964
Q948S5_TOBAC
M11074_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA2_01 		0.826 0.885
PK12011.1
M01279_2.00 		Cannabis sativa
HAACGGHHNN
NNDDCCGTTD		 PBM
Lambert et al.(2019)
pTH11423 		0.792 0.871
MYB3R4
M07125_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R4_col_a 		0.766 0.842
Q948S4_TOBAC
M11073_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBB_01 		0.676 0.727
Q948S6_TOBAC
M11075_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA1_01 		0.669 0.784
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo7g115810.1 Myb 32 78
Bo7g115810.1 Myb 84 130
Bo7g115810.1 Myb 136 180

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

152 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R011740 Calypte anna Aan_R011740 N 0.000
Brh_R007751 Buceros rhinoceros Brh_R007751 N 0.000
L3MBTL3 Anolis carolinensis ENSACAG00000014140 N 0.000
ENSAMEG00000007825 Ailuropoda melanoleuca ENSAMEG00000007825 N 0.000
ENSAMXG00000010244 Astyanax mexicanus ENSAMXG00000010244 N 0.000
ENSAPLG00000011121 Anas platyrhynchos ENSAPLG00000011121 N 0.000
L3MBTL3 Bos taurus ENSBTAG00000017393 N 0.000
L3MBTL3 Canis familiaris ENSCAFG00000001115 N 0.000
L3MBTL3 Choloepus hoffmanni ENSCHOG00000011296 N 0.000
L3MBTL3 Callithrix jacchus ENSCJAG00000003235 N 0.000
L3MBTL3 Cavia porcellus ENSCPOG00000006280 N 0.000
ENSCSAG00000016589 Chlorocebus sabaeus ENSCSAG00000016589 N 0.000
l3mbtl3 Danio rerio ENSDARG00000025983 N 0.000
L3MBTL3 Dasypus novemcinctus ENSDNOG00000019298 N 0.000
L3mbtl3 Dipodomys ordii ENSDORG00000013929 N 0.000
L3MBTL3 Equus caballus ENSECAG00000006343 N 0.000
L3MBTL3 Erinaceus europaeus ENSEEUG00000008805 N 0.000
ENSFALG00000011622 Ficedula albicollis ENSFALG00000011622 N 0.000
L3MBTL3 Felis catus ENSFCAG00000001466 N 0.000
L3MBTL3 Homo sapiens ENSG00000198945 N 0.000
ENSGALG00000014009 Gallus gallus ENSGALG00000014009 N 0.000
L3MBTL3 Gorilla gorilla ENSGGOG00000000549 N 0.000
ENSLACG00000022431 Latimeria chalumnae ENSLACG00000022431 N 0.000
ENSLOCG00000017277 Lepisosteus oculatus ENSLOCG00000017277 N 0.000
ENSMEUG00000014341 Macropus eugenii ENSMEUG00000014341 N 0.000
L3MBTL3 Meleagris gallopavo ENSMGAG00000013190 N 0.000
L3MBTL3 Microcebus murinus ENSMICG00000006114 N 0.000
L3MBTL3 Macaca mulatta ENSMMUG00000021498 N 0.000
L3MBTL3 Monodelphis domestica ENSMODG00000017623 N 0.000
ENSMPUG00000014637 Mustela putorius furo ENSMPUG00000014637 N 0.000
ENSNLEG00000026803 Nomascus leucogenys ENSNLEG00000026803 N 0.000
ENSOARG00000013771 Ovis aries ENSOARG00000013771 N 0.000
L3MBTL3 Oryctolagus cuniculus ENSOCUG00000016226 N 0.000
L3MBTL3 Otolemur garnettii ENSOGAG00000001632 N 0.000
L3MBTL3 Ochotona princeps ENSOPRG00000003872 N 0.000
ENSP00000354526-D1 Bos grunniens ENSP00000354526-D1 N 0.000
ENSP00000357118 Macaca fascicularis ENSP00000357118 N 0.000
ENSPANG00000010327 Papio anubis ENSPANG00000010327 N 0.000
ENSPPYG00000017002 Pongo abelii ENSPPYG00000017002 N 0.000
ENSPSIG00000009472 Pelodiscus sinensis ENSPSIG00000009472 N 0.000
L3MBTL3 Pan troglodytes ENSPTRG00000023858 N 0.000
L3MBTL3 Sorex araneus ENSSARG00000012237 N 0.000
ENSSHAG00000017557 Sarcophilus harrisii ENSSHAG00000017557 N 0.000
L3MBTL3 Sus scrofa ENSSSCG00000004203 N 0.000
ENSSTOG00000009978 Ictidomys tridecemlineatus ENSSTOG00000009978 N 0.000
L3MBTL3 Tupaia belangeri ENSTBEG00000013158 N 0.000
L3MBTL3 Taeniopygia guttata ENSTGUG00000011709 N 0.000
ENSTSYG00000008001 Tarsius syrichta ENSTSYG00000008001 N 0.000
L3MBTL3 Tursiops truncatus ENSTTRG00000010125 N 0.000
L3MBTL3 Vicugna pacos ENSVPAG00000002988 N 0.000
Gfo_R016211 Geospiza fortis Gfo_R016211 N 0.000
Pvit_01718 Pogona vitticeps Pvit_01718 N 0.000
Sakowv30043999m.g Saccoglossus kowalevskii Sakowv30043999m.g N 0.000