Bo9g174380 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo9g174380 T267652_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SRM1
M02307_2.00 		Arabidopsis thaliana
NNHNATCNN
NNGATNDNN		 PBM
Weirauch et al.(2014)
pTH7080 		0.846 0.957
SRM1
M07121_2.00 		Arabidopsis thaliana
YCTTATCYWHW
WDWRGATAAGR		 Dap-seq
OMalley et al.(2016)
At5g08520_colamp_a 		0.846 0.957
SRM1
M07122_2.00 		Arabidopsis thaliana
YCTTATCYWHWWH
DWWDWRGATAAGR		 Dap-seq
OMalley et al.(2016)
At5g08520_col_b 		0.846 0.957
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo9g174380.1 Myb 112 157

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava32082.m1 Manihot esculenta cassava32082.m1 N
cassava33852.m1 Manihot esculenta cassava33852.m1 N
CFIO01_08658 Colletotrichum fioriniae CFIO01_08658 N
e_gw1.4.238.1 Coccomyxa subellipsoidea C169 e_gw1.4.238.1 N
GK25519 Drosophila willistoni FBgn0227478 N
OLONG_022000 Oryza longistaminata OLONG_022000 N
PABG_01887 Paracoccidioides brasiliensis PABG_01887 N