CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CDC5L
(
Ornithorhynchus anatinus
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
ENSOANG00000008262
T269817_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CDC5L
M11049_2.00
Homo sapiens
GWKTTAAYRTAD
HTAYRTTAAMWC
Transfac
Matys et al.(2006)
V$CDC5_01
0.909
1.000
CDC5
M02698_2.00
Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN
SELEX
Mathelier et al.(2014)
MA0579.1
0.814
0.870
CDC5
M11037_2.00
Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN
Transfac
Matys et al.(2006)
P$CDC5_01
0.814
0.870
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOANP00000013124
Myb
8
54
GGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWL
ENSOANP00000013124
Myb
60
104
KTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLL
Links
Other
Myb/SANT
family TFs
Other
Ornithorhynchus anatinus
TFs
575 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_060_00005
Aquilegia coerulea
Aquca_060_00005
N
cassava11920.valid.m1
Manihot esculenta
cassava11920.valid.m1
N
cassava32963.m1
Manihot esculenta
cassava32963.m1
N
cassava7505.valid.m1
Manihot esculenta
cassava7505.valid.m1
N
Ca_02696
Cicer arietinum
Ca_02696
N
Ciclev10020072m.g
Citrus clementina
Ciclev10020072m.g
N
Cla007135
Citrullus lanatus
Cla007135
N
Cucsa.362140
Cucumis sativus
Cucsa.362140
N
Eucgr.A00109
Eucalyptus grandis
Eucgr.A00109
N
evm.TU.supercontig_9.323
Carica papaya
evm.TU.supercontig_9.323
N
GLYMA05G22460
Glycine max
GLYMA05G22460
N
GLYMA15G03290
Glycine max
GLYMA15G03290
N
Gorai.011G140100
Gossypium raimondii
Gorai.011G140100
N
GSMUA_Achr6G21350_001
Musa acuminata
GSMUA_Achr6G21350_001
N
GSMUA_Achr9G02380_001
Musa acuminata
GSMUA_Achr9G02380_001
N
MDP0000147173
Malus domestica
MDP0000147173
N
MDP0000165587
Malus domestica
MDP0000165587
N
MTR_2g099110
Medicago truncatula
MTR_2g099110
N
orange1.1g047247m.g
Citrus sinensis
orange1.1g047247m.g
N
PGSC0003DMG400014615
Solanum tuberosum
PGSC0003DMG400014615
N
PGSC0003DMG400021444
Solanum tuberosum
PGSC0003DMG400021444
N
PK11022.1
Cannabis sativa
PK11022.1
N
Pm007259
Prunus mume
Pm007259
N
POPTR_0017s05450
Populus trichocarpa
POPTR_0017s05450
N
PRUPE_ppa1027119mg
Prunus persica
PRUPE_ppa1027119mg
N
SapurV1A.0485s0200
Salix purpurea
SapurV1A.0485s0200
N
SapurV1A.0791s0060
Salix purpurea
SapurV1A.0791s0060
N
SapurV1A.1272s0060
Salix purpurea
SapurV1A.1272s0060
N
SapurV1A.1357s0040
Salix purpurea
SapurV1A.1357s0040
N
Solyc02g092370.1
Solanum lycopersicum
Solyc02g092370.1
N
Solyc08g014030.1
Solanum lycopersicum
Solyc08g014030.1
N
SHR
Vitis vinifera
VIT_07s0129g00030
N