CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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F443_09333
(
Phytophthora parasitica
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
F443_09333
T270261_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Phyra73031
M02332_2.00
Phytophthora ramorum
NDRKTCAGTN
NACTGAMYHN
PBM
Weirauch et al.(2014)
pTH7816
0.780
0.797
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ETI46253
Myb
112
158
PKRWTPEEDDKLREAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVL
ETI46253
Myb
164
209
KGHWRPEEDELLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHL
ETI46253
Myb
215
259
RGEYSPEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSL
Links
Other
Myb/SANT
family TFs
Other
Phytophthora parasitica
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F443_09674
Phytophthora parasitica
F443_09674
N
fgenesh_scip_prom.28083.7556
Phytophthora lateralis
fgenesh_scip_prom.28083.7556
N
maker-pag1_scaffold_106-fgenesh-gene-0.12
Pythium aphanidermatum
maker-pag1_scaffold_106-fgenesh-gene-0.12
N
maker-par_contig_313-fgenesh-gene-0.2
Pythium arrhenomanes
maker-par_contig_313-fgenesh-gene-0.2
N
maker-pir_contig_264-snap-gene-0.19
Pythium irregulare
maker-pir_contig_264-snap-gene-0.19
N
maker-piw_contig_1064-fgenesh-gene-0.2
Pythium iwayamai
maker-piw_contig_1064-fgenesh-gene-0.2
N
maker-pve_contig_7-fgenesh-gene-0.20
Pythium vexans
maker-pve_contig_7-fgenesh-gene-0.20
N
Phyra85385
Phytophthora ramorum
Phyra85385
N
Physo134456
Phytophthora sojae
Physo134456
N
PITG_19220
Phytophthora infestans
PITG_19220
N
PYU1_G014859
Pythium ultimum
PYU1_G014859
N
SPRG_07821
Saprolegnia parasitica
SPRG_07821
N