CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSPATT00026886001
(
Paramecium tetraurelia
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
GSPATT00026886001
T272951_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TTHERM_00202940
M02335_2.00
Tetrahymena thermophila
NNRDATCYN
NRGATHYNN
PBM
Weirauch et al.(2014)
pTH8726
0.760
0.783
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAK94562
Myb
32
77
QGRWTKDEHQRFVEALSIHGKNWKKVEEYVGTRSGAQIRSHAQKFF
Links
Other
Myb/SANT
family TFs
Other
Paramecium tetraurelia
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_gwp_gw1.C_2850022
Physcomitrella patens
estExt_gwp_gw1.C_2850022
N
evm.TU.supercontig_137.19
Carica papaya
evm.TU.supercontig_137.19
N
e_gw1.301.32.1
Physcomitrella patens
e_gw1.301.32.1
N
GSMUA_Achr7G04840_001
Musa acuminata
GSMUA_Achr7G04840_001
N
POPTR_0001s01210
Populus trichocarpa
POPTR_0001s01210
N
POPTR_0003s10360
Populus trichocarpa
POPTR_0003s10360
N
SapurV1A.1496s0030
Salix purpurea
SapurV1A.1496s0030
N
VIT_02s0087g00140
Vitis vinifera
VIT_02s0087g00140
N