CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_137.19
(
Carica papaya
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
evm.TU.supercontig_137.19
T287062_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_137.19
Myb
49
107
PQWGHQETKDFIAIRAELEKDFKVAKRNKTLWEIVSSKMRERGYRRTPDQCKCKWKNLV
Links
Other
Myb/SANT
family TFs
Other
Carica papaya
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava14644.m1
Manihot esculenta
cassava14644.m1
N
0.828
POPTR_0001s01210
Populus trichocarpa
POPTR_0001s01210
N
0.777
SapurV1A.1496s0030
Salix purpurea
SapurV1A.1496s0030
N
0.777
VIT_02s0087g00140
Vitis vinifera
VIT_02s0087g00140
N
0.759
estExt_gwp_gw1.C_2850022
Physcomitrella patens
estExt_gwp_gw1.C_2850022
N
0.729
POPTR_0003s10360
Populus trichocarpa
POPTR_0003s10360
N
0.717
e_gw1.301.32.1
Physcomitrella patens
e_gw1.301.32.1
N
0.711
AMTR_s00048p00225900
Amborella trichopoda
AMTR_s00048p00225900
N
0.696
GSMUA_Achr7G04840_001
Musa acuminata
GSMUA_Achr7G04840_001
N
0.677
MTR_5g026540
Medicago truncatula
MTR_5g026540
N
0.676
Ca_10636
Cicer arietinum
Ca_10636
N
0.676
chr2.CM0803.380.nc
Lotus japonicus
chr2.CM0803.380.nc
N
0.676
GLYMA01G35370
Glycine max
GLYMA01G35370
N
0.667