MTR_1g013170 (Medicago truncatula)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 MTR_1g013170 T274677_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARR1
M02296_2.00 		Arabidopsis thaliana
NDGATHYBNN
NNVRDATCHN		 PBM
Weirauch et al.(2014)
pTH8257 		0.741 0.809
ARR1
M02297_2.00 		Arabidopsis thaliana
NAAGATHCKN
NMGDATCTTN		 PBM
Weirauch et al.(2014)
pTH8590 		0.739 0.809
ARR10
M02702_2.00 		Arabidopsis thaliana
AGATHYKN
NMRDATCT		 SELEX
Mathelier et al.(2014)
MA0121.1 		0.678 0.681
ARR10
M11045_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ARR10_01 		0.678 0.681
ARR18
M02313_2.00 		Arabidopsis thaliana
NNNNAGATAYGNN
NNCRTATCTNNNN		 PBM
Weirauch et al.(2014)
pTH8840 		0.669 0.766
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH39870 Myb 193 243

Links

Other Myb/SANT family TFs
Other Medicago truncatula TFs

222 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30138.m003899 Ricinus communis 30138.m003899 I
30138.m003913 Ricinus communis 30138.m003913 I
AMTR_s00006p00250310 Amborella trichopoda AMTR_s00006p00250310 I
Aquca_002_00952 Aquilegia coerulea Aquca_002_00952 I
BIM1 Arabidopsis thaliana AT5G08130 D
BGIOSGA005697 Oryza indica BGIOSGA005697 I
BGIOSGA028888 Oryza indica BGIOSGA028888 I
BGIOSGA030958 Oryza indica BGIOSGA030958 I
Bo2g161110 Brassica oleracea Bo2g161110 I
Bo3g004690 Brassica oleracea Bo3g004690 I
Bo5g020460 Brassica oleracea Bo5g020460 I
Bo9g174770 Brassica oleracea Bo9g174770 I
Bostr.13129s0152 Boechera stricta Bostr.13129s0152 I
Bra005969 Brassica rapa Bra005969 I
Bra009322 Brassica rapa Bra009322 I
Bra029354 Brassica rapa Bra029354 I
BRADI3G38970 Brachypodium distachyon BRADI3G38970 I
BRADI4G32967 Brachypodium distachyon BRADI4G32967 I
Cagra.1365s0019 Capsella grandiflora Cagra.1365s0019 I
Carubv10000655m.g Capsella rubella Carubv10000655m.g I
cassava29314.valid.m1 Manihot esculenta cassava29314.valid.m1 I
cassava29318.valid.m1 Manihot esculenta cassava29318.valid.m1 I
cassava43370.valid.m1 Manihot esculenta cassava43370.valid.m1 I
cassava43379.valid.m1 Manihot esculenta cassava43379.valid.m1 I
Ciclev10020248m.g Citrus clementina Ciclev10020248m.g I
Ciclev10032020m.g Citrus clementina Ciclev10032020m.g I
Cla018818 Citrullus lanatus Cla018818 I
Cla022382 Citrullus lanatus Cla022382 I
Cucsa.113490 Cucumis sativus Cucsa.113490 I
Cucsa.198520 Cucumis sativus Cucsa.198520 I
Cucsa.328060 Cucumis sativus Cucsa.328060 I
estExt_fgenesh1_pg.C_2110039 Physcomitrella patens estExt_fgenesh1_pg.C_2110039 I
Eucgr.B00645 Eucalyptus grandis Eucgr.B00645 I
evm.TU.supercontig_289.6 Carica papaya evm.TU.supercontig_289.6 I
evm.TU.supercontig_3.225 Carica papaya evm.TU.supercontig_3.225 I
F775_23096 Aegilops tauschii F775_23096 I
fgenesh1_pg.scaffold_37000071 Physcomitrella patens fgenesh1_pg.scaffold_37000071 D
gene04534-v1.0-hybrid Fragaria vesca gene04534-v1.0-hybrid I
gene26139-v1.0-hybrid Fragaria vesca gene26139-v1.0-hybrid I
GLYMA01G09010 Glycine max GLYMA01G09010 I
GLYMA02G13670 Glycine max GLYMA02G13670 I
GLYMA05G07490 Glycine max GLYMA05G07490 I
GLYMA17G08980 Glycine max GLYMA17G08980 I
Gorai.006G269200 Gossypium raimondii Gorai.006G269200 I
GRMZM2G009478 Zea mays GRMZM2G009478 I
GRMZM2G089501 Zea mays GRMZM2G089501 I
GRMZM2G317450 Zea mays GRMZM2G317450 I
GSMUA_Achr2G05450_001 Musa acuminata GSMUA_Achr2G05450_001 I
GSMUA_Achr3G10640_001 Musa acuminata GSMUA_Achr3G10640_001 I
GSMUA_Achr4G19530_001 Musa acuminata GSMUA_Achr4G19530_001 I
GSMUA_Achr9G19110_001 Musa acuminata GSMUA_Achr9G19110_001 I
GSMUA_Achr9G28050_001 Musa acuminata GSMUA_Achr9G28050_001 I
gw1.90.123.1 Physcomitrella patens gw1.90.123.1 I
LPERR08G15680 Leersia perrieri LPERR08G15680 I
LPERR09G10080 Leersia perrieri LPERR09G10080 I
Lus10007974.g Linum usitatissimum Lus10007974.g I
Lus10013502.g Linum usitatissimum Lus10013502.g I
MDP0000261293 Malus domestica MDP0000261293 I
mgf001137m Mimulus guttatus mgf001137m I
mgf005849m Mimulus guttatus mgf005849m I
mgf013208m Mimulus guttatus mgf013208m I
MTR_4g110040 Medicago truncatula MTR_4g110040 I
OB02G38020 Oryza brachyantha OB02G38020 I
OB08G25940 Oryza brachyantha OB08G25940 I
OBART09G13850 Oryza barthii OBART09G13850 I
OGLUM08G19830 Oryza glumaepatula OGLUM08G19830 I
OGLUM09G14430 Oryza glumaepatula OGLUM09G14430 I
OLONG_003583 Oryza longistaminata OLONG_003583 I
OLONG_020060 Oryza longistaminata OLONG_020060 I
OMERI09G10560 Oryza meridionalis OMERI09G10560 I
ONIVA08G20800 Oryza nivara ONIVA08G20800 I
ONIVA09G14370 Oryza nivara ONIVA09G14370 I
OPUNC08G16820 Oryza punctata OPUNC08G16820 I
OPUNC09G12310 Oryza punctata OPUNC09G12310 I
orange1.1g019960m.g Citrus sinensis orange1.1g019960m.g I
orange1.1g038451m.g Citrus sinensis orange1.1g038451m.g I
ORGLA02G0264700 Oryza glaberrima ORGLA02G0264700 I
ORGLA06G0286200 Oryza glaberrima ORGLA06G0286200 I
ORGLA08G0164200 Oryza glaberrima ORGLA08G0164200 I
ORGLA09G0105800 Oryza glaberrima ORGLA09G0105800 I
ORUFI08G21030 Oryza rufipogon ORUFI08G21030 I
ORUFI09G14830 Oryza rufipogon ORUFI09G14830 I
OS02G0726700 Oryza sativa OS02G0726700 I
OS08G0490000 Oryza sativa OS08G0490000 I
OS09G0475400 Oryza sativa OS09G0475400 I
Pavir.Aa00700 Panicum virgatum Pavir.Aa00700 I
Pavir.Ab03017 Panicum virgatum Pavir.Ab03017 I
Pavir.Fb01833 Panicum virgatum Pavir.Fb01833 I
Pavir.J04606 Panicum virgatum Pavir.J04606 I
Pavir.J38910 Panicum virgatum Pavir.J38910 I
PGSC0003DMG400001919 Solanum tuberosum PGSC0003DMG400001919 I
PGSC0003DMG400019654 Solanum tuberosum PGSC0003DMG400019654 I
PK01364.1 Cannabis sativa PK01364.1 I
PK10562.1 Cannabis sativa PK10562.1 I
POPTR_0008s11120 Populus trichocarpa POPTR_0008s11120 I
POPTR_0010s14740 Populus trichocarpa POPTR_0010s14740 I
POPTR_0012s06650 Populus trichocarpa POPTR_0012s06650 I
POPTR_0015s03550 Populus trichocarpa POPTR_0015s03550 I
PRUPE_ppa003436mg Prunus persica PRUPE_ppa003436mg I
PRUPE_ppa008387mg Prunus persica PRUPE_ppa008387mg I
SapurV1A.0060s0510 Salix purpurea SapurV1A.0060s0510 I
SapurV1A.0084s0570 Salix purpurea SapurV1A.0084s0570 I
SapurV1A.0178s0150 Salix purpurea SapurV1A.0178s0150 I
SapurV1A.0868s0010 Salix purpurea SapurV1A.0868s0010 I
Sb02g027460 Sorghum bicolor Sb02g027460 I
Sb04g029270 Sorghum bicolor Sb04g029270 I
Sb07g028860 Sorghum bicolor Sb07g028860 I
BIM1 Arabidopsis lyrata scaffold_600819.1 I
SELMODRAFT_451475 Selaginella moellendorffii SELMODRAFT_451475 I
SELMODRAFT_451477 Selaginella moellendorffii SELMODRAFT_451477 I
Si013622m.g Setaria italica Si013622m.g I
Si016505m.g Setaria italica Si016505m.g I
Si029604m.g Setaria italica Si029604m.g I
Solyc03g114720.2 Solanum lycopersicum Solyc03g114720.2 I
Solyc04g005280.2 Solanum lycopersicum Solyc04g005280.2 I
Solyc05g011810.2 Solanum lycopersicum Solyc05g011810.2 I
Solyc06g069370.2 Solanum lycopersicum Solyc06g069370.2 I
TCM_014392 Theobroma cacao TCM_014392 I
Thhalv10013181m.g Eutrema salsugineum Thhalv10013181m.g I
Traes_5AL_0D4BDDDCD Triticum aestivum Traes_5AL_0D4BDDDCD I
Traes_5BL_AAC9C7238 Triticum aestivum Traes_5BL_AAC9C7238 I
Traes_5DL_E96693018 Triticum aestivum Traes_5DL_E96693018 I
BIM2 Vitis vinifera VIT_01s0010g00540 I
BIM1 Vitis vinifera VIT_17s0000g04790 I