CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

MTR_3g110028 *(Medicago truncatula)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00249 (Myb_DNA-binding)	IPR014778	MTR_3g110028	T274783_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Q948S5_TOBAC M11074_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MYBA2_01	0.844	0.914
PC-MYB1 M07110_2.00	Arabidopsis thaliana	NDWWNTDRCCGTTRN	NYAACGGYHANWWHN	Dap-seq OMalley et al.(2016) MYB3R1_col_a	0.835	0.899
PC-MYB1 M07111_2.00	Arabidopsis thaliana	DWHNTDRCCGTTR	YAACGGYHANDWH	Dap-seq OMalley et al.(2016) MYB3R1_colamp_a	0.835	0.899
PK12011.1 M01279_2.00	Cannabis sativa	HAACGGHHNN	NNDDCCGTTD	PBM Lambert et al.(2019) pTH11423	0.800	0.885
MYB3R4 M07125_2.00	Arabidopsis thaliana	NDWWNTDRCCGTTRN	NYAACGGYHANWWHN	Dap-seq OMalley et al.(2016) MYB3R4_col_a	0.785	0.856
Q948S4_TOBAC M11073_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MYBB_01	0.690	0.748
Q948S6_TOBAC M11075_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MYBA1_01	0.685	0.791
MYB3R5 M07116_2.00	Arabidopsis thaliana	NWWWWNTDRCCGTTR	YAACGGYHANWWWWN	Dap-seq OMalley et al.(2016) MYB3R5_col_a	0.663	0.755
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
KEH36007	Myb	33	79	KGQWTPEEDNILRKAVERFQGKNWKKIAECFKDRTDVQCLHRWQKVL
KEH36007	Myb	85	131	KGPWSKEEDETIVDLVNKYGPKKWSTIAQHLPGRIGKQCRERWHNHL
KEH36007	Myb	137	181	KEAWTQEEELALIHAHQIYGNRWAELSKFLPGRTDNAIKNHWNSS

Links
Other Myb/SANT family TFs
Other *Medicago truncatula* TFs

161 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
AALB007616	Anopheles albimanus	AALB007616	N
AARA005940	Anopheles arabiensis	AARA005940	N
AATE014022	Anopheles atroparvus	AATE014022	N
ACUA011355	Anopheles culicifacies	ACUA011355	N
ADAC000344	Anopheles darlingi	ADAC000344	N
ADIR005744	Anopheles dirus	ADIR005744	N
AFUN006471	Anopheles funestus	AFUN006471	N
AMIN005007	Anopheles minimus	AMIN005007	N
AQUA005986	Anopheles quadriannulatus	AQUA005986	N
ASIS014017	Anopheles sinensis	ASIS014017	N
CPIJ008798	Culex quinquefasciatus	CPIJ008798	N
CpipJ_CPIJ008798	Culex pipiens	CpipJ_CPIJ008798	N
LLOJ001381	Lutzomyia longipalpis	LLOJ001381	N