MTR_5g029470 (Medicago truncatula)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 MTR_5g029470 T274855_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KAN2
M07018_2.00 		Arabidopsis thaliana
HHHNDWATATTCTYH
DRAGAATATWHNDDD		 Dap-seq
OMalley et al.(2016)
KAN2_col_a 		0.909 1.000
KAN2
M07019_2.00 		Arabidopsis thaliana
NWWTATTCYYH
DRRGAATAWWN		 Dap-seq
OMalley et al.(2016)
KAN2_colamp_a 		0.909 1.000
KAN1
M00878_2.00 		Arabidopsis thaliana
NNRTNBNN
NNVNAYNN		 PBM
Franco-Zorrilla et al.(2014)
KAN1 		0.875 0.957
KAN1
M02308_2.00 		Arabidopsis thaliana
NDNDTAHNHN
NDNDTAHNHN		 PBM
Weirauch et al.(2014)
pTH7135 		0.875 0.957
KAN4
M00881_2.00 		Arabidopsis thaliana
NWNRTBCNN
NNGVAYNWN		 PBM
Franco-Zorrilla et al.(2014)
KAN4 		0.786 0.915
AT1G14600
M01268_2.00 		Arabidopsis thaliana
NWAYATTCYN
NRGAATRTWN		 PBM
Lambert et al.(2019)
pTH11557 		0.667 0.723
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES95783 Myb 221 272

Links

Other Myb/SANT family TFs
Other Medicago truncatula TFs

395 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29788.m000340 Ricinus communis 29788.m000340 I
Aquca_030_00038 Aquilegia coerulea Aquca_030_00038 I
MYB305 Arabidopsis thaliana AT3G24310 I
ATMYB48 Arabidopsis thaliana AT3G46130 I
MYB27 Arabidopsis thaliana AT3G53200 D
AtMYB79 Arabidopsis thaliana AT4G13480 I
MYB59 Arabidopsis thaliana AT5G59780 D
BGIOSGA005283 Oryza indica BGIOSGA005283 I
BGIOSGA035986 Oryza indica BGIOSGA035986 I
Bo1g098860 Brassica oleracea Bo1g098860 I
Bo2g025410 Brassica oleracea Bo2g025410 I
Bo3g083130 Brassica oleracea Bo3g083130 I
Bo3g130340 Brassica oleracea Bo3g130340 I
Bo6g067190 Brassica oleracea Bo6g067190 I
Bo7g033260 Brassica oleracea Bo7g033260 I
Bo7g050560 Brassica oleracea Bo7g050560 I
Bo8g082570 Brassica oleracea Bo8g082570 I
Bostr.19424s0195 Boechera stricta Bostr.19424s0195 I
Bostr.2021s0106 Boechera stricta Bostr.2021s0106 I
Bostr.9544s0002 Boechera stricta Bostr.9544s0002 I
Bra001941 Brassica rapa Bra001941 I
Bra006694 Brassica rapa Bra006694 I
Bra006977 Brassica rapa Bra006977 I
Bra012482 Brassica rapa Bra012482 I
Bra015029 Brassica rapa Bra015029 I
Bra018223 Brassica rapa Bra018223 I
Bra020289 Brassica rapa Bra020289 I
Bra028369 Brassica rapa Bra028369 I
Bra028550 Brassica rapa Bra028550 I
BRADI2G62510 Brachypodium distachyon BRADI2G62510 I
BRADI4G04050 Brachypodium distachyon BRADI4G04050 I
Cagra.0454s0003 Capsella grandiflora Cagra.0454s0003 I
Cagra.0612s0043 Capsella grandiflora Cagra.0612s0043 I
Cagra.15509s0001 Capsella grandiflora Cagra.15509s0001 I
Carubv10007255m.g Capsella rubella Carubv10007255m.g I
Carubv10014367m.g Capsella rubella Carubv10014367m.g I
Carubv10017875m.g Capsella rubella Carubv10017875m.g I
Carubv10019409m.g Capsella rubella Carubv10019409m.g I
cassava13589.valid.m1 Manihot esculenta cassava13589.valid.m1 I
cassava24463.valid.m1 Manihot esculenta cassava24463.valid.m1 I
cassava9891.m1 Manihot esculenta cassava9891.m1 I
Ca_07872 Cicer arietinum Ca_07872 I
Ciclev10006914m.g Citrus clementina Ciclev10006914m.g I
Ciclev10013466m.g Citrus clementina Ciclev10013466m.g I
Cla008413 Citrullus lanatus Cla008413 I
Cla013488 Citrullus lanatus Cla013488 I
Cucsa.213500 Cucumis sativus Cucsa.213500 I
Cucsa.238540 Cucumis sativus Cucsa.238540 I
Cucsa.379880 Cucumis sativus Cucsa.379880 I
Eucgr.A01648 Eucalyptus grandis Eucgr.A01648 I
Eucgr.I02057 Eucalyptus grandis Eucgr.I02057 I
evm.TU.supercontig_190.35 Carica papaya evm.TU.supercontig_190.35 I
evm.TU.supercontig_59.23 Carica papaya evm.TU.supercontig_59.23 I
evm.TU.supercontig_92.99 Carica papaya evm.TU.supercontig_92.99 I
F775_06315 Aegilops tauschii F775_06315 I
F775_29427 Aegilops tauschii F775_29427 I
ATMYB48-1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5001097 I
fgenesh2_kg.3__2645__AT3G24310.1 Arabidopsis lyrata fgenesh2_kg.3__2645__AT3G24310.1 I
AtMYB27 Arabidopsis lyrata fgenesh2_kg.5__1687__AT3G53200.1 I
MYB59 Arabidopsis lyrata fgenesh2_kg.8__1928__AT5G59780.3 I
fgenesh2_kg.9__1__AT4G13480.1 Arabidopsis lyrata fgenesh2_kg.9__1__AT4G13480.1 I
gene09683-v1.0-hybrid Fragaria vesca gene09683-v1.0-hybrid I
gene28293-v1.0-hybrid Fragaria vesca gene28293-v1.0-hybrid I
GLYMA05G35050 Glycine max GLYMA05G35050 I
GLYMA08G04670 Glycine max GLYMA08G04670 I
GLYMA10G26681 Glycine max GLYMA10G26681 I
GLYMA13G40830 Glycine max GLYMA13G40830 I
GLYMA15G04620 Glycine max GLYMA15G04620 I
GLYMA17G17560 Glycine max GLYMA17G17560 I
GLYMA20G20980 Glycine max GLYMA20G20980 I
Gorai.001G107900 Gossypium raimondii Gorai.001G107900 I
Gorai.003G136400 Gossypium raimondii Gorai.003G136400 I
Gorai.005G054900 Gossypium raimondii Gorai.005G054900 I
Gorai.006G073500 Gossypium raimondii Gorai.006G073500 I
Gorai.006G254200 Gossypium raimondii Gorai.006G254200 I
Gorai.009G413600 Gossypium raimondii Gorai.009G413600 I
Gorai.013G265300 Gossypium raimondii Gorai.013G265300 I
GRMZM2G047626 Zea mays GRMZM2G047626 I
GRMZM2G130149 Zea mays GRMZM2G130149 I
GSMUA_Achr10G03710_001 Musa acuminata GSMUA_Achr10G03710_001 I
GSMUA_Achr10G13520_001 Musa acuminata GSMUA_Achr10G13520_001 I
GSMUA_Achr11G24690_001 Musa acuminata GSMUA_Achr11G24690_001 I
GSMUA_Achr5G28350_001 Musa acuminata GSMUA_Achr5G28350_001 I
GSMUA_Achr6G15370_001 Musa acuminata GSMUA_Achr6G15370_001 I
GSMUA_Achr7G18200_001 Musa acuminata GSMUA_Achr7G18200_001 I
GSMUA_Achr8G02640_001 Musa acuminata GSMUA_Achr8G02640_001 I
GSMUA_Achr8G34340_001 Musa acuminata GSMUA_Achr8G34340_001 I
LPERR01G40120 Leersia perrieri LPERR01G40120 I
LPERR12G13390 Leersia perrieri LPERR12G13390 I
Lus10005079.g Linum usitatissimum Lus10005079.g I
Lus10005886.g Linum usitatissimum Lus10005886.g I
Lus10023711.g Linum usitatissimum Lus10023711.g I
Lus10034372.g Linum usitatissimum Lus10034372.g I
MDP0000143156 Malus domestica MDP0000143156 I
MDP0000177010 Malus domestica MDP0000177010 I
MDP0000286143 Malus domestica MDP0000286143 I
mgf004640m Mimulus guttatus mgf004640m I
MLOC_52439 Hordeum vulgare MLOC_52439 I
MTR_1g045610 Medicago truncatula MTR_1g045610 I
MTR_1g073170 Medicago truncatula MTR_1g073170 I
MTR_4g063100 Medicago truncatula MTR_4g063100 I
OB01G54920 Oryza brachyantha OB01G54920 I
OB11G27690 Oryza brachyantha OB11G27690 I
OB12G23080 Oryza brachyantha OB12G23080 I
OBART01G45730 Oryza barthii OBART01G45730 I
OPUNC01G44650 Oryza punctata OPUNC01G44650 I
orange1.1g023677m.g Citrus sinensis orange1.1g023677m.g I
orange1.1g047839m.g Citrus sinensis orange1.1g047839m.g I
orange1.1g047854m.g Citrus sinensis orange1.1g047854m.g I
ORGLA01G0394700 Oryza glaberrima ORGLA01G0394700 I
ORGLA12G0141600 Oryza glaberrima ORGLA12G0141600 I
ORGLA12G0206100 Oryza glaberrima ORGLA12G0206100 I
ORUFI01G49220 Oryza rufipogon ORUFI01G49220 I
ORUFI12G17930 Oryza rufipogon ORUFI12G17930 I
MYBAS2 Oryza sativa OS12G0567300 I
Pavir.Ca02588 Panicum virgatum Pavir.Ca02588 I
Pavir.J11500 Panicum virgatum Pavir.J11500 I
PGSC0003DMG400001376 Solanum tuberosum PGSC0003DMG400001376 I
PGSC0003DMG400001504 Solanum tuberosum PGSC0003DMG400001504 I
PGSC0003DMG400027202 Solanum tuberosum PGSC0003DMG400027202 I
PK10274.1 Cannabis sativa PK10274.1 I
Pm000809 Prunus mume Pm000809 I
Pm009050 Prunus mume Pm009050 I
Pm015392 Prunus mume Pm015392 I
POPTR_0001s24220 Populus trichocarpa POPTR_0001s24220 I
POPTR_0004s11720 Populus trichocarpa POPTR_0004s11720 I
POPTR_0010s07450 Populus trichocarpa POPTR_0010s07450 I
POPTR_0017s13370 Populus trichocarpa POPTR_0017s13370 I
PRUPE_ppa015954mg Prunus persica PRUPE_ppa015954mg I
PRUPE_ppa016385mg Prunus persica PRUPE_ppa016385mg I
PRUPE_ppa024234mg Prunus persica PRUPE_ppa024234mg I
SapurV1A.0008s0940 Salix purpurea SapurV1A.0008s0940 I
SapurV1A.0008s0950 Salix purpurea SapurV1A.0008s0950 I
SapurV1A.0096s0360 Salix purpurea SapurV1A.0096s0360 I
SapurV1A.0323s0160 Salix purpurea SapurV1A.0323s0160 I
Sb08g018580 Sorghum bicolor Sb08g018580 I
Si023104m.g Setaria italica Si023104m.g I
Solyc02g089190.1 Solanum lycopersicum Solyc02g089190.1 I
Solyc05g053150.1 Solanum lycopersicum Solyc05g053150.1 I
Solyc09g090790.2 Solanum lycopersicum Solyc09g090790.2 I
TCM_018971 Theobroma cacao TCM_018971 I
TCM_022293 Theobroma cacao TCM_022293 I
TCM_041904 Theobroma cacao TCM_041904 I
Thhalv10002634m.g Eutrema salsugineum Thhalv10002634m.g I
Thhalv10002648m.g Eutrema salsugineum Thhalv10002648m.g I
Thhalv10005370m.g Eutrema salsugineum Thhalv10005370m.g I
Thhalv10010915m.g Eutrema salsugineum Thhalv10010915m.g I
Thhalv10014524m.g Eutrema salsugineum Thhalv10014524m.g I
TRAES3BF065400010CFD_g Triticum aestivum TRAES3BF065400010CFD_g I
Traes_3AL_A8AF980F3 Triticum aestivum Traes_3AL_A8AF980F3 I
TRIUR3_16862 Triticum urartu TRIUR3_16862 I
TRIUR3_22432 Triticum urartu TRIUR3_22432 I
VIT_05s0049g02260 Vitis vinifera VIT_05s0049g02260 I
AtMYB27 Vitis vinifera VIT_08s0007g04830 I
ATMYB121 Vitis vinifera VIT_14s0083g01060 I