CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

TCM_005402 *(Theobroma cacao)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00249 (Myb_DNA-binding)	IPR014778	TCM_005402	T280447_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
PC-MYB1 M07110_2.00	Arabidopsis thaliana	NDWWNTDRCCGTTRN	NYAACGGYHANWWHN	Dap-seq OMalley et al.(2016) MYB3R1_col_a	0.663	0.759
PC-MYB1 M07111_2.00	Arabidopsis thaliana	DWHNTDRCCGTTR	YAACGGYHANDWH	Dap-seq OMalley et al.(2016) MYB3R1_colamp_a	0.663	0.759
Q948S4_TOBAC M11073_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MYBB_01	0.663	0.745
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
EOX96058	Myb	57	103	KGGWTEEEDKMLTTAVQKFNGKNWKKIAECVPDRTDVQCLHRWQKVL
EOX96058	Myb	109	155	KGPWSKEEDELIFELVEKQGKKKWSEIAKYLPGRIGKQCRERWFNHL
EOX96058	Myb	161	203	KTAWTEEEELVLIRAHGTYGNRWAEIAKLLPGRTENSIKNHWN

Links
Other Myb/SANT family TFs
Other *Theobroma cacao* TFs