VIT_14s0066g01010 (Vitis vinifera)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 VIT_14s0066g01010 T282048_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB118
M07087_2.00 		Arabidopsis thaliana
DHWDHRDMCGTTACDWW
WWHGTAACGKHYDHWDH		 Dap-seq
OMalley et al.(2016)
MYB118_col_a 		0.730 0.806
MYB118
M07088_2.00 		Arabidopsis thaliana
DWWWYGTAACGKHYR
YRDMCGTTACRWWWH		 Dap-seq
OMalley et al.(2016)
MYB118_colamp_a 		0.730 0.806
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_14s0066g01010.t01 Myb 182 228
VIT_14s0066g01010.t01 Myb 234 279

Links

Other Myb/SANT family TFs
Other Vitis vinifera TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCEY_00663 Ancylostoma ceylanicum ANCCEY_00663 N 0.000
CBG02238 Caenorhabditis briggsae CBG02238 N 0.000
CBG11894 Caenorhabditis briggsae CBG11894 N 0.000
CBN17666 Caenorhabditis brenneri CBN17666 N 0.000
CGOC_0000831401 Cylicostephanus goldi CGOC_0000831401 N 0.000
CJA04706 Caenorhabditis japonica CJA04706 N 0.000
CRE03839 Caenorhabditis remanei CRE03839 N 0.000
CRE04844 Caenorhabditis remanei CRE04844 N 0.000
DICVIV_00632 Dictyocaulus viviparus DICVIV_00632 N 0.000
DME_0000374801 Dracunculus medinensis DME_0000374801 N 0.000
genemark-nMf.1.1.scaf00296-processed-gene-0.4 Meloidogyne floridensis genemark-nMf.1.1.scaf00296-processed-gene-0.4 I 0.000
HCOI00011100 Haemonchus contortus HCOI00011100 N 0.000
HCOI00340600 Haemonchus contortus HCOI00340600 N 0.000
HPLM_0001619301 Haemonchus placei HPLM_0001619301 N 0.000
L893_g29578 Steinernema glaseri L893_g29578 N 0.000
MhA1_Contig2458.frz3.gene1 Meloidogyne hapla MhA1_Contig2458.frz3.gene1 I 0.000
Minc12652 Meloidogyne incognita Minc12652 I 0.000
nAv.1.0.1.g08857 Acanthocheilonema viteae nAv.1.0.1.g08857 N 0.000
NBR_0001570201 Nippostrongylus brasiliensis NBR_0001570201 N 0.000
nDi.2.2.2.g07634 Dirofilaria immitis nDi.2.2.2.g07634 N 0.000
nLs.2.1.2.g07567 Litomosoides sigmodontis nLs.2.1.2.g07567 N 0.000
nOo.2.0.1.g05364 Onchocerca ochengi nOo.2.0.1.g05364 N 0.000
nRc.2.0.1.g10725 Romanomermis culicivorax nRc.2.0.1.g10725 I 0.000
PPA14638 Pristionchus pacificus PPA14638 N 0.000
PTRK_0000206200 Parastrongyloides trichosuri PTRK_0000206200 I 0.000
scaffold516-EXSNAP2012.12 Pristionchus exspectatus scaffold516-EXSNAP2012.12 N 0.000
TCNE_0001553601 Toxocara canis TCNE_0001553601 N 0.000
TELCIR_02717 Teladorsagia circumcincta TELCIR_02717 N 0.000
cey-2 Caenorhabditis elegans WBGene00000473 N 0.000
cey-3 Caenorhabditis elegans WBGene00000474 N 0.000
WBGene00246599 Onchocerca volvulus WBGene00246599 N 0.000
WUBG_08453 Wuchereria bancrofti WUBG_08453 N 0.000
WUBG_17286 Wuchereria bancrofti WUBG_17286 N 0.000