MYB98 (Vitis vinifera)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 VIT_17s0000g08550 T282095_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB118
M07087_2.00 		Arabidopsis thaliana
DHWDHRDMCGTTACDWW
WWHGTAACGKHYDHWDH		 Dap-seq
OMalley et al.(2016)
MYB118_col_a 		0.708 0.774
MYB118
M07088_2.00 		Arabidopsis thaliana
DWWWYGTAACGKHYR
YRDMCGTTACRWWWH		 Dap-seq
OMalley et al.(2016)
MYB118_colamp_a 		0.708 0.774
MYB98
M02301_2.00 		Arabidopsis thaliana
NNGTAACGKMN
NKMCGTTACNN		 PBM
Weirauch et al.(2014)
pTH8148 		0.694 0.849
MYB98
M07108_2.00 		Arabidopsis thaliana
DWWWHGTAACGKWHD
HDWMCGTTACDWWWH		 Dap-seq
OMalley et al.(2016)
MYB98_col_a 		0.694 0.849
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_17s0000g08550.t01 Myb 189 235
VIT_17s0000g08550.t01 Myb 241 286

Links

Other Myb/SANT family TFs
Other Vitis vinifera TFs

164 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ILI5 Oryza indica BGIOSGA005623 N 0.000
ILI4 Oryza indica BGIOSGA022576 N 0.000
BRADI1G45260 Brachypodium distachyon BRADI1G45260 N 0.000
BRADI3G59290 Brachypodium distachyon BRADI3G59290 N 0.000
F775_27240 Aegilops tauschii F775_27240 N 0.000
GRMZM2G036092 Zea mays GRMZM2G036092 N 0.000
LPERR02G26590 Leersia perrieri LPERR02G26590 N 0.000
LPERR06G07460 Leersia perrieri LPERR06G07460 N 0.000
MLOC_55094 Hordeum vulgare MLOC_55094 N 0.000
OB02G39450 Oryza brachyantha OB02G39450 N 0.000
OB06G17570 Oryza brachyantha OB06G17570 N 0.000
OBART02G32470 Oryza barthii OBART02G32470 N 0.000
OGLUM02G33100 Oryza glumaepatula OGLUM02G33100 N 0.000
OLONG_003198 Oryza longistaminata OLONG_003198 N 0.000
OMERI02G31120 Oryza meridionalis OMERI02G31120 N 0.000
OMERI06G09660 Oryza meridionalis OMERI06G09660 N 0.000
ONIVA06G04530 Oryza nivara ONIVA06G04530 N 0.000
OPUNC02G30020 Oryza punctata OPUNC02G30020 N 0.000
OPUNC06G07810 Oryza punctata OPUNC06G07810 N 0.000
ORGLA02G0280200 Oryza glaberrima ORGLA02G0280200 N 0.000
ORGLA06G0076300 Oryza glaberrima ORGLA06G0076300 N 0.000
ORUFI02G34170 Oryza rufipogon ORUFI02G34170 N 0.000
ILI5 Oryza sativa OS02G0747900 N 0.000
ILI4 Oryza sativa OS06G0226500 N 0.000
Pavir.Ab02945 Panicum virgatum Pavir.Ab02945 N 0.000
Pavir.Db01746 Panicum virgatum Pavir.Db01746 N 0.000
Pavir.J09493 Panicum virgatum Pavir.J09493 N 0.000
Pavir.J39793 Panicum virgatum Pavir.J39793 N 0.000
Sb10g008000 Sorghum bicolor Sb10g008000 N 0.000
Si007662m.g Setaria italica Si007662m.g N 0.000
Traes_6DL_3F9FA4887 Triticum aestivum Traes_6DL_3F9FA4887 N 0.000
TRIUR3_29197 Triticum urartu TRIUR3_29197 N 0.000