Cla016403 (Citrullus lanatus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cla016403 T283267_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
APRR2
M02300_2.00 		Arabidopsis thaliana
NNRNWATCNN
NNGATWNYNN		 PBM
Weirauch et al.(2014)
pTH7102 		0.727 0.830
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla016403 Myb 287 337

Links

Other Myb/SANT family TFs
Other Citrullus lanatus TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00017p00086440 Amborella trichopoda AMTR_s00017p00086440 I
Aquca_017_00778 Aquilegia coerulea Aquca_017_00778 I
STOP1 Arabidopsis thaliana AT1G34370 D
BGIOSGA004888 Oryza indica BGIOSGA004888 I
Bo8g027000 Brassica oleracea Bo8g027000 I
Bostr.1040s0032 Boechera stricta Bostr.1040s0032 I
Bra040971 Brassica rapa Bra040971 I
BRADI2G56320 Brachypodium distachyon BRADI2G56320 I
Cagra.12398s0002 Capsella grandiflora Cagra.12398s0002 I
Carubv10008876m.g Capsella rubella Carubv10008876m.g I
cassava22193.valid.m1 Manihot esculenta cassava22193.valid.m1 I
cassava24483.valid.m1 Manihot esculenta cassava24483.valid.m1 I
Ca_04300 Cicer arietinum Ca_04300 I
Ciclev10000850m.g Citrus clementina Ciclev10000850m.g I
Cla016623 Citrullus lanatus Cla016623 I
Cucsa.079940 Cucumis sativus Cucsa.079940 I
Eucgr.F02627 Eucalyptus grandis Eucgr.F02627 I
F775_04088 Aegilops tauschii F775_04088 I
STOP1 Arabidopsis lyrata fgenesh2_kg.1__3547__AT1G34370.2 I
gene27486-v1.0-hybrid Fragaria vesca gene27486-v1.0-hybrid I
GLYMA10G35940 Glycine max GLYMA10G35940 I
GLYMA16G27280 Glycine max GLYMA16G27280 I
GLYMA20G31650 Glycine max GLYMA20G31650 I
Gorai.006G131700 Gossypium raimondii Gorai.006G131700 I
GRMZM2G075956 Zea mays GRMZM2G075956 I
GRMZM2G129428 Zea mays GRMZM2G129428 I
GSMUA_Achr10G15970_001 Musa acuminata GSMUA_Achr10G15970_001 I
GSMUA_Achr5G01170_001 Musa acuminata GSMUA_Achr5G01170_001 I
LPERR01G33350 Leersia perrieri LPERR01G33350 I
LPERR03G34390 Leersia perrieri LPERR03G34390 I
Lus10009435.g Linum usitatissimum Lus10009435.g I
MDP0000141403 Malus domestica MDP0000141403 I
MDP0000199559 Malus domestica MDP0000199559 I
MDP0000453148 Malus domestica MDP0000453148 I
MDP0000551046 Malus domestica MDP0000551046 I
MDP0000807856 Malus domestica MDP0000807856 I
mgf000060m Mimulus guttatus mgf000060m I
MLOC_10987 Hordeum vulgare MLOC_10987 I
OB01G47470 Oryza brachyantha OB01G47470 I
OB03G47410 Oryza brachyantha OB03G47410 I
OBART01G38810 Oryza barthii OBART01G38810 I
OLONG_020555 Oryza longistaminata OLONG_020555 I
ONIVA01G43630 Oryza nivara ONIVA01G43630 I
OPUNC01G37530 Oryza punctata OPUNC01G37530 I
orange1.1g009831m.g Citrus sinensis orange1.1g009831m.g I
ORGLA01G0326400 Oryza glaberrima ORGLA01G0326400 I
ORUFI01G42150 Oryza rufipogon ORUFI01G42150 I
OS01G0871200 Oryza sativa OS01G0871200 I
Pavir.Ia00191 Panicum virgatum Pavir.Ia00191 I
Pavir.J01834 Panicum virgatum Pavir.J01834 I
Pavir.J06328 Panicum virgatum Pavir.J06328 I
Pavir.J12018 Panicum virgatum Pavir.J12018 I
Pavir.J14096 Panicum virgatum Pavir.J14096 I
PDK_20s1338731g001 Phoenix dactylifera PDK_20s1338731g001 I
PGSC0003DMG400009234 Solanum tuberosum PGSC0003DMG400009234 I
PGSC0003DMG400026081 Solanum tuberosum PGSC0003DMG400026081 I
PK23301.1 Cannabis sativa PK23301.1 I
Pm022201 Prunus mume Pm022201 I
POPTR_0019s11520 Populus trichocarpa POPTR_0019s11520 I
SapurV1A.0287s0150 Salix purpurea SapurV1A.0287s0150 I
SapurV1A.2334s0030 Salix purpurea SapurV1A.2334s0030 I
Sb01g001950 Sorghum bicolor Sb01g001950 I
Sb03g041170 Sorghum bicolor Sb03g041170 I
SELMODRAFT_48272 Selaginella moellendorffii SELMODRAFT_48272 I
SELMODRAFT_58350 Selaginella moellendorffii SELMODRAFT_58350 I
SELMODRAFT_58361 Selaginella moellendorffii SELMODRAFT_58361 I
SELMODRAFT_68340 Selaginella moellendorffii SELMODRAFT_68340 I
Si001053m.g Setaria italica Si001053m.g I
Si036555m.g Setaria italica Si036555m.g I
Solyc06g065440.1 Solanum lycopersicum Solyc06g065440.1 I
Solyc11g017140.1 Solanum lycopersicum Solyc11g017140.1 I
TCM_036719 Theobroma cacao TCM_036719 I
Thhalv10007411m.g Eutrema salsugineum Thhalv10007411m.g I
TRAES3BF044200110CFD_g Triticum aestivum TRAES3BF044200110CFD_g I
Traes_3AL_00FAACD5D Triticum aestivum Traes_3AL_00FAACD5D I
Traes_3DL_0284E68CC1 Triticum aestivum Traes_3DL_0284E68CC1 I
TRIUR3_13796 Triticum urartu TRIUR3_13796 I
STOP1 Vitis vinifera VIT_18s0072g00840 I