CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pm.chr_11_#_297
(
Ostreococcus RCC809
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
fgenesh1_pm.chr_11_#_297
T284925_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pm.chr_11_#_297
Myb
37
88
RGYWSQPEEQALKRAVRKHGIGAWEKMRNDPEFTALRSRTGVQLKDKWRNLI
Links
Other
Myb/SANT
family TFs
Other
Ostreococcus RCC809
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10000255m.g
Citrus clementina
Ciclev10000255m.g
N
gene00378-v1.0-hybrid
Fragaria vesca
gene00378-v1.0-hybrid
N
GLYMA08G24400
Glycine max
GLYMA08G24400
N
Gorai.011G224000
Gossypium raimondii
Gorai.011G224000
N
Gorai.012G021400
Gossypium raimondii
Gorai.012G021400
N
MDP0000318097
Malus domestica
MDP0000318097
N
orange1.1g035792m.g
Citrus sinensis
orange1.1g035792m.g
N
POPTR_0008s01240
Populus trichocarpa
POPTR_0008s01240
N
PRUPE_ppa001310mg
Prunus persica
PRUPE_ppa001310mg
N
SapurV1A.0070s0640
Salix purpurea
SapurV1A.0070s0640
N
Solyc01g096850.2
Solanum lycopersicum
Solyc01g096850.2
N
TCM_044608
Theobroma cacao
TCM_044608
N
VIT_13s0047g00330
Vitis vinifera
VIT_13s0047g00330
N