gene18432-v1.0-hybrid (Fragaria vesca)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gene18432-v1.0-hybrid T287332_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK21687.1
M01282_2.00 		Cannabis sativa
HWAAACCYH
DRGGTTTWD		 PBM
Lambert et al.(2019)
pTH11299 		0.883 0.936
TRP1
M07148_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCTAA
TTAGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP1_col 		0.883 0.936
TRP2
M07092_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCC
GGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_col_a 		0.883 0.936
TRP2
M07093_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCT
AGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_colamp_a 		0.883 0.936
TRP5
M01266_2.00 		Arabidopsis thaliana
NHWAAACCYH
DRGGTTTWDN		 PBM
Lambert et al.(2019)
pTH9963 		0.823 0.915
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna18432.1-v1.0-hybrid Myb 568 618

Links

Other Myb/SANT family TFs
Other Fragaria vesca TFs

197 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL006597 Aedes aegypti AAEL006597 I
Aan_R009530 Calypte anna Aan_R009530 I
AARA010121 Anopheles arabiensis AARA010121 I
AATE016309 Anopheles atroparvus AATE016309 I
ACEP23863 Atta cephalotes ACEP23863 I
ACHR006588 Anopheles christyi ACHR006588 I
ACOM028774 Anopheles coluzzii ACOM028774 I
ACUA019412 Anopheles culicifacies ACUA019412 I
ACYPI002893 Acyrthosiphon pisum ACYPI002893 I
ADAC003526 Anopheles darlingi ADAC003526 I
ADIR005347 Anopheles dirus ADIR005347 I
AEPI001627 Anopheles epiroticus AEPI001627 I
AFAF013479 Anopheles farauti AFAF013479 I
AFUN008966 Anopheles funestus AFUN008966 I
AGAP003671 Anopheles gambiae AGAP003671 I
Alligator_sinensis_CCG000534.1 Alligator sinensis Alligator_sinensis_CCG000534.1 I
AMAM011860 Anopheles maculatus AMAM011860 I
AMEC017317 Anopheles melas AMEC017317 I
AMEM005009 Anopheles merus AMEM005009 I
AMIN004031 Anopheles minimus AMIN004031 I
AQUA001538 Anopheles quadriannulatus AQUA001538 I
ASIM_0001224701 Anisakis simplex ASIM_0001224701 I
ASIS007650 Anopheles sinensis ASIS007650 I
ASTEI07437 Anopheles stephensi ASTEI07437 I
A_02450 Schistosoma haematobium A_02450 I
A_06201 Schistosoma haematobium A_06201 I
BGIBMGA010706 Bombyx mori BGIBMGA010706 I
BGLB010692 Biomphalaria glabrata BGLB010692 I
BTMF_0000772101 Brugia timori BTMF_0000772101 I
CapteG79432 Capitella teleta CapteG79432 I
CGI_10023919 Crassostrea gigas CGI_10023919 I
CGOC_0001018301 Cylicostephanus goldi CGOC_0001018301 I
CLEC002956 Cimex lectularius CLEC002956 I
CPIJ004109 Culex quinquefasciatus CPIJ004109 I
CpipJ_CPIJ004109 Culex pipiens CpipJ_CPIJ004109 I
csin109461 Clonorchis sinensis csin109461 I
D915_02578 Fasciola hepatica D915_02578 I
D918_06873 Trichuris suis D918_06873 I
ECANG7_00763 Echinococcus canadensis ECANG7_00763 I
EmuJ_000895600 Echinococcus multilocularis EmuJ_000895600 I
ENSACAG00000026683 Anolis carolinensis ENSACAG00000026683 I
ENSAMEG00000002866 Ailuropoda melanoleuca ENSAMEG00000002866 I
ENSAMEG00000009342 Ailuropoda melanoleuca ENSAMEG00000009342 I
ENSAMXG00000002250 Astyanax mexicanus ENSAMXG00000002250 I
ENSAMXG00000003840 Astyanax mexicanus ENSAMXG00000003840 I
ENSAMXG00000009415 Astyanax mexicanus ENSAMXG00000009415 I
ENSAMXG00000015414 Astyanax mexicanus ENSAMXG00000015414 I
ENSAMXG00000024837 Astyanax mexicanus ENSAMXG00000024837 I
ENSAPLG00000014690 Anas platyrhynchos ENSAPLG00000014690 I
NKX3-1 Bos taurus ENSBTAG00000001221 I
NKX3-2 Bos taurus ENSBTAG00000010896 I
ENSBTAP00000001615-D1 Bos grunniens ENSBTAP00000001615-D1 I
ENSCAFG00000009107 Canis familiaris ENSCAFG00000009107 I
NKX3-2 Canis familiaris ENSCAFG00000015412 I
NKX2-6 Canis familiaris ENSCAFG00000024691 I
ENSCHOG00000011132 Choloepus hoffmanni ENSCHOG00000011132 I
ENSCING00000007395 Ciona intestinalis ENSCING00000007395 D
hlx Ciona intestinalis ENSCING00000019191 I
NKX3-2 Callithrix jacchus ENSCJAG00000012159 I
NKX3-1 Callithrix jacchus ENSCJAG00000020092 I
NKX3-2 Cavia porcellus ENSCPOG00000005449 I
ENSCPOG00000010557 Cavia porcellus ENSCPOG00000010557 I
ENSCSAG00000016229 Chlorocebus sabaeus ENSCSAG00000016229 I
ENSCSAG00000016338 Chlorocebus sabaeus ENSCSAG00000016338 I
nkx3.2 Danio rerio ENSDARG00000037639 I
nkx3.3 Danio rerio ENSDARG00000069327 I
nkx3-1 Danio rerio ENSDARG00000078280 I
NKX3-2 Dasypus novemcinctus ENSDNOG00000043074 I
NKX3-1 Dasypus novemcinctus ENSDNOG00000044451 I
ENSECAG00000001509 Equus caballus ENSECAG00000001509 I
NKX2-6 Equus caballus ENSECAG00000013714 I
NKX3-1 Erinaceus europaeus ENSEEUG00000001113 I
ENSEEUG00000012691 Erinaceus europaeus ENSEEUG00000012691 I
NKX3-1 Echinops telfairi ENSETEG00000018790 I
ENSFALG00000011121 Ficedula albicollis ENSFALG00000011121 I
NKX3-2 Homo sapiens ENSG00000109705 D
NKX3-1 Homo sapiens ENSG00000167034 D
nkx3.3 Gasterosteus aculeatus ENSGACG00000007573 I
nkx3-1 Gasterosteus aculeatus ENSGACG00000010776 I
nkx3.2 Gasterosteus aculeatus ENSGACG00000016378 I
NKX3-2 Gorilla gorilla ENSGGOG00000008589 I
NKX3-1 Gorilla gorilla ENSGGOG00000014369 I
ENSGMOG00000005518 Gadus morhua ENSGMOG00000005518 I
ENSGMOG00000018725 Gadus morhua ENSGMOG00000018725 I
ENSLACG00000003608 Latimeria chalumnae ENSLACG00000003608 I
ENSLACG00000012763 Latimeria chalumnae ENSLACG00000012763 I
NKX3-1 Loxodonta africana ENSLAFG00000008941 I
NKX3-2 Loxodonta africana ENSLAFG00000031404 I
ENSLOCG00000009031 Lepisosteus oculatus ENSLOCG00000009031 I
ENSLOCG00000009892 Lepisosteus oculatus ENSLOCG00000009892 I
ENSLOCG00000015015 Lepisosteus oculatus ENSLOCG00000015015 I
ENSMICG00000000190 Microcebus murinus ENSMICG00000000190 I
NKX3-1 Microcebus murinus ENSMICG00000011189 I
NKX3-1 Myotis lucifugus ENSMLUG00000006118 I
NKX3-2 Myotis lucifugus ENSMLUG00000008362 I
NKX3-1 Macaca mulatta ENSMMUG00000009796 I
ENSMMUG00000022026 Macaca mulatta ENSMMUG00000022026 I
NKX3-1 Monodelphis domestica ENSMODG00000016789 I
NKX3-2 Monodelphis domestica ENSMODG00000024753 I
ENSMPUG00000000476 Mustela putorius furo ENSMPUG00000000476 I
ENSMPUG00000003418 Mustela putorius furo ENSMPUG00000003418 I
Nkx3-1 Mus musculus ENSMUSG00000022061 D
Nkx3-2 Mus musculus ENSMUSG00000049691 D
ENSNLEG00000015968 Nomascus leucogenys ENSNLEG00000015968 I
ENSNLEG00000016256 Nomascus leucogenys ENSNLEG00000016256 I
NKX3-1 Ornithorhynchus anatinus ENSOANG00000008027 I
ENSOARG00000010071 Ovis aries ENSOARG00000010071 I
NKX3-1 Oryctolagus cuniculus ENSOCUG00000004294 I
NKX3-2 Oryctolagus cuniculus ENSOCUG00000009039 I
NKX3-1 Otolemur garnettii ENSOGAG00000001303 I
NKX3-2 Otolemur garnettii ENSOGAG00000015615 I
ENSONIG00000000279 Oreochromis niloticus ENSONIG00000000279 I
ENSONIG00000002379 Oreochromis niloticus ENSONIG00000002379 I
ENSONIG00000011762 Oreochromis niloticus ENSONIG00000011762 I
ENSONIG00000018347 Oreochromis niloticus ENSONIG00000018347 I
NKX3-1 Ochotona princeps ENSOPRG00000003179 I
ENSOPRG00000005452 Ochotona princeps ENSOPRG00000005452 I
nkx3.2 Oryzias latipes ENSORLG00000000593 I
ENSORLG00000007716 Oryzias latipes ENSORLG00000007716 I
nkx3-1 Oryzias latipes ENSORLG00000010925 I
ENSP00000370253 Macaca fascicularis ENSP00000370253 I
ENSP00000371875 Macaca fascicularis ENSP00000371875 I
ENSPANG00000004934 Papio anubis ENSPANG00000004934 I
ENSPANG00000021310 Papio anubis ENSPANG00000021310 I
NKX3-2 Procavia capensis ENSPCAG00000013077 I
ENSPCAG00000016644 Procavia capensis ENSPCAG00000016644 I
ENSPFOG00000002882 Poecilia formosa ENSPFOG00000002882 I
ENSPFOG00000009440 Poecilia formosa ENSPFOG00000009440 I
ENSPFOG00000009654 Poecilia formosa ENSPFOG00000009654 I
ENSPFOG00000020885 Poecilia formosa ENSPFOG00000020885 I
ENSPPYG00000014611 Pongo abelii ENSPPYG00000014611 I
ENSPPYG00000018442 Pongo abelii ENSPPYG00000018442 I
ENSPSIG00000012169 Pelodiscus sinensis ENSPSIG00000012169 I
ENSPSIG00000017342 Pelodiscus sinensis ENSPSIG00000017342 I
NKX3-1 Pan troglodytes ENSPTRG00000020081 I
ENSPTRG00000031253 Pan troglodytes ENSPTRG00000031253 I
NKX3-2 Pteropus vampyrus ENSPVAG00000002830 I
NKX3-1 Pteropus vampyrus ENSPVAG00000005378 I
NKX2-6 Pteropus vampyrus ENSPVAG00000005380 I
Nkx3-1 Rattus norvegicus ENSRNOG00000015477 I
Nkx3-2 Rattus norvegicus ENSRNOG00000060782 I
ENSSARG00000001895 Sorex araneus ENSSARG00000001895 I
ENSSHAG00000015475 Sarcophilus harrisii ENSSHAG00000015475 I
ENSSSCG00000024594 Sus scrofa ENSSSCG00000024594 I
ENSSSCG00000028216 Sus scrofa ENSSSCG00000028216 I
ENSSTOG00000021803 Ictidomys tridecemlineatus ENSSTOG00000021803 I
ENSTBEG00000002319 Tupaia belangeri ENSTBEG00000002319 I
ENSTGUG00000004550 Taeniopygia guttata ENSTGUG00000004550 I
nkx3.2 Tetraodon nigroviridis ENSTNIG00000015732 I
NKX2-3 Takifugu rubripes ENSTRUG00000002729 I
NKX2-3 Takifugu rubripes ENSTRUG00000003800 I
nkx3.2 Takifugu rubripes ENSTRUG00000014438 I
ENSTSYG00000007109 Tarsius syrichta ENSTSYG00000007109 I
ENSTTRG00000003623 Tursiops truncatus ENSTTRG00000003623 I
ENSTTRG00000012332 Tursiops truncatus ENSTTRG00000012332 I
NKX3-1 Vicugna pacos ENSVPAG00000004503 I
ENSXMAG00000005680 Xiphophorus maculatus ENSXMAG00000005680 I
ENSXMAG00000016282 Xiphophorus maculatus ENSXMAG00000016282 I
ENSXMAG00000020095 Xiphophorus maculatus ENSXMAG00000020095 I
ENSXMAG00000020262 Xiphophorus maculatus ENSXMAG00000020262 I
estExt_fgenesh2_pg.C_1430013 Branchiostoma floridae estExt_fgenesh2_pg.C_1430013 I
bap Drosophila melanogaster FBgn0004862 D
bap Drosophila simulans FBgn0067504 I
bap Drosophila sechellia FBgn0067536 I
GA20672 Drosophila pseudoobscura FBgn0080666 I
GF18600 Drosophila ananassae FBgn0095618 I
GG24598 Drosophila erecta FBgn0116730 I
GH22032 Drosophila grimshawi FBgn0129493 I
GI21951 Drosophila mojavensis FBgn0144680 I
GL27337 Drosophila persimilis FBgn0164918 I
GJ14311 Drosophila virilis FBgn0201526 I
GK14503 Drosophila willistoni FBgn0216509 I
GE25732 Drosophila yakuba FBgn0242790 I
GB47401 Apis mellifera GB47401 I
HelroG138724 Helobdella robusta HelroG138724 I
HelroG148616 Helobdella robusta HelroG148616 I
HMEL006181 Heliconius melpomene HMEL006181 I
Hsal_06436--XP_001120208.1_APIME Harpegnathos saltator Hsal_06436--XP_001120208.1_APIME I
ISCW014989 Ixodes scapularis ISCW014989 I
KGM_11246 Danaus plexippus KGM_11246 I
L893_g18140 Steinernema glaseri L893_g18140 I
LCUP000733 Lucilia cuprina LCUP000733 I
LDEC009723 Leptinotarsa decemlineata LDEC009723 I
LotgiG60615 Lottia gigantea LotgiG60615 I
MCINX004875 Melitaea cinxia MCINX004875 I
MCOS_0000074801 Mesocestoides corti MCOS_0000074801 I
MDOA010758 Musca domestica MDOA010758 I
MESCA006298 Megaselia scalaris MESCA006298 I
Minc11316 Meloidogyne incognita Minc11316 I
Myotis_brandtii_NKX3_10014306 Myotis brandtii Myotis_brandtii_NKX3_10014306 I
NEMVEDRAFT_v1g208034 Nematostella vectensis NEMVEDRAFT_v1g208034 I
nLs.2.1.2.g07743 Litomosoides sigmodontis nLs.2.1.2.g07743 I
NV25828 Nasonia vitripennis NV25828 I
Ocbimv22026957m.g Octopus bimaculoides Ocbimv22026957m.g I
PHUM439840 Pediculus humanus PHUM439840 I
PPAI010327 Phlebotomus papatasi PPAI010327 I
Pvit_15821 Pogona vitticeps Pvit_15821 I
PXEA_0003190801 Protopolystoma xenopodis PXEA_0003190801 I
RPRC001122 Rhodnius prolixus RPRC001122 I
Sakowv30040088m.g Saccoglossus kowalevskii Sakowv30040088m.g I
SINV22315 Solenopsis invicta SINV22315 I
SMAR005030 Strigamia maritima SMAR005030 I
Smp_140730 Schistosoma mansoni Smp_140730 I
SMRZ_0000016501 Schistosoma margrebowiei SMRZ_0000016501 I
SMTD_0000549701 Schistosoma mattheei SMTD_0000549701 I
SMU15003549 Schmidtea mediterranea SMU15003549 I
SPU_013047 Strongylocentrotus purpuratus SPU_013047 I
TASK_0000475201 Taenia asiatica TASK_0000475201 I
TC012743 Tribolium castaneum TC012743 I
TCLT_0000478201 Thelazia callipaeda TCLT_0000478201 I
tetur04g08350 Tetranychus urticae tetur04g08350 I
TsM_000540100 Taenia solium TsM_000540100 I
TTAC_0000184701 Hydatigera taeniaeformis TTAC_0000184701 I
TTRE_0000463801 Trichuris trichiura TTRE_0000463801 I
WUBG_10043 Wuchereria bancrofti WUBG_10043 I
nkx3-1.L Xenopus laevis XB-GENE-479031 I
nkx3-3 Xenopus tropicalis XB-GENE-479908 I
nkx3-1.S Xenopus laevis XB-GENE-6252708 I
nkx3-2 Xenopus tropicalis XB-GENE-876834 I
nkx3-2.S Xenopus laevis XB-GENE-876836 I
XP_002932598 Xenopus tropicalis XP_002932598 I
YQE_10102 Dendroctonus ponderosae YQE_10102 I