Gorai.012G054500 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.012G054500 T287783_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB30
M07089_2.00 		Arabidopsis thaliana
NHHHCAACYACYWHH
DDWRGTRGTTGDDDN		 Dap-seq
OMalley et al.(2016)
MYB30_col_a 		0.881 0.968
MYB30
M07090_2.00 		Arabidopsis thaliana
HHHYYHCCAACYAMY
RKTRGTTGGDRRDDD		 Dap-seq
OMalley et al.(2016)
MYB30_colamp_a 		0.881 0.968
MYB94
M02298_2.00 		Arabidopsis thaliana
DACCGGTH
DACCGGTH		 PBM
Weirauch et al.(2014)
pTH7085 		0.861 0.935
MYB94
M07094_2.00 		Arabidopsis thaliana
HHNYHYCAACYACYWHHNN
NNDDWRGTRGTTGRDRNDD		 Dap-seq
OMalley et al.(2016)
MYB94_col_b 		0.861 0.935
MYB60
M07001_2.00 		Arabidopsis thaliana
HNNHYYCAACYACYWHHNN
NNDDWRGTRGTTGRRDNND		 Dap-seq
OMalley et al.(2016)
MYB60_col 		0.851 0.935
MYB96
M07153_2.00 		Arabidopsis thaliana
HHHHHYHHCCAACYAHYWNHN
NDNWRDTRGTTGGDDRDDDDD		 Dap-seq
OMalley et al.(2016)
MYB96_colamp_a 		0.842 0.935
MYB96
M07154_2.00 		Arabidopsis thaliana
YAMCHNCCAMCHAHHHHH
DDDDDTDGKTGGNDGKTR		 Dap-seq
OMalley et al.(2016)
MYB96_col_b 		0.842 0.935
ATY13
M07035_2.00 		Arabidopsis thaliana
HAMCHMCCAMCHAHH
DDTDGKTGGKDGKTD		 Dap-seq
OMalley et al.(2016)
ATY13_col_a 		0.833 0.935
ATY13
M07036_2.00 		Arabidopsis thaliana
HAMCHHCCAACHAHH
DDTDGTTGGDDGKTD		 Dap-seq
OMalley et al.(2016)
ATY13_colamp_a 		0.833 0.935
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.012G054500.1 Myb 14 61
Gorai.012G054500.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

311 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL008417 Aedes aegypti AAEL008417 N 0.000
AALB007196 Anopheles albimanus AALB007196 N 0.000
AARA009694 Anopheles arabiensis AARA009694 N 0.000
AATE006267 Anopheles atroparvus AATE006267 N 0.000
ACAC_0000409101 Angiostrongylus cantonensis ACAC_0000409101 N 0.000
ACEP12759 Atta cephalotes ACEP12759 I 0.000
ACHR002403 Anopheles christyi ACHR002403 N 0.000
ACOC_0001323101 Angiostrongylus costaricensis ACOC_0001323101 N 0.000
ACOM033320 Anopheles coluzzii ACOM033320 N 0.000
ACUA003510 Anopheles culicifacies ACUA003510 N 0.000
ACYPI003297 Acyrthosiphon pisum ACYPI003297 I 0.000
ADAC009894 Anopheles darlingi ADAC009894 N 0.000
ADIR002941 Anopheles dirus ADIR002941 N 0.000
AEPI008570 Anopheles epiroticus AEPI008570 N 0.000
AFAF018499 Anopheles farauti AFAF018499 N 0.000
AFUN011346 Anopheles funestus AFUN011346 N 0.000
AGAP004110 Anopheles gambiae AGAP004110 N 0.000
ALNC14_126360 Albugo laibachii ALNC14_126360 N 0.000
ALUE_0001851001 Ascaris lumbricoides ALUE_0001851001 N 0.000
AMAM021723 Anopheles maculatus AMAM021723 N 0.000
AMEC005071 Anopheles melas AMEC005071 N 0.000
AMEM002948 Anopheles merus AMEM002948 N 0.000
AMIN003838 Anopheles minimus AMIN003838 N 0.000
ANCCAN_29654 Ancylostoma caninum ANCCAN_29654 N 0.000
ANCCEY_08672 Ancylostoma ceylanicum ANCCEY_08672 N 0.000
AQUA009805 Anopheles quadriannulatus AQUA009805 N 0.000
ASIS023527 Anopheles sinensis ASIS023527 N 0.000
ASTEI04275 Anopheles stephensi ASTEI04275 N 0.000
ASU_10445 Ascaris suum ASU_10445 N 0.000
A_06553 Schistosoma haematobium A_06553 N 0.000
BGIBMGA013514 Bombyx mori BGIBMGA013514 N 0.000
BRADI1G29730 Brachypodium distachyon BRADI1G29730 I 0.000
CapteG224864 Capitella teleta CapteG224864 I 0.000
CBN09380 Caenorhabditis brenneri CBN09380 N 0.000
Cflo_06133--XP_394373.1_APIME Camponotus floridanus Cflo_06133--XP_394373.1_APIME I 0.000
CGI_10019404 Crassostrea gigas CGI_10019404 N 0.000
CJA05209 Caenorhabditis japonica CJA05209 N 0.000
CLEC000086 Cimex lectularius CLEC000086 N 0.000
CLEC002888 Cimex lectularius CLEC002888 N 0.000
CPIJ005084 Culex quinquefasciatus CPIJ005084 N 0.000
CpipJ_CPIJ005084 Culex pipiens CpipJ_CPIJ005084 N 0.000
CRE03905 Caenorhabditis remanei CRE03905 N 0.000
CY34DRAFT_106474 Suillus luteus CY34DRAFT_106474 N 0.000
D917_07703 Trichinella nativa D917_07703 N 0.000
D918_07944 Trichuris suis D918_07944 N 0.000
DAPPUDRAFT_303074 Daphnia pulex DAPPUDRAFT_303074 N 0.000
DICVIV_03175 Dictyocaulus viviparus DICVIV_03175 N 0.000
DILT_0001250601 Diphyllobothrium latum DILT_0001250601 N 0.000
EFV51436 Trichinella spiralis EFV51436 N 0.000
ENSCING00000023833 Ciona intestinalis ENSCING00000023833 N 0.000
ccdc124 Oryzias latipes ENSORLG00000015728 N 0.000
estExt_fgenesh1_kg.C_80399 Phytophthora capsici estExt_fgenesh1_kg.C_80399 N 0.000
estExt_fgenesh2_pg.C_1070085 Branchiostoma floridae estExt_fgenesh2_pg.C_1070085 N 0.000
estExt_fgenesh2_pm.C_3240002 Branchiostoma floridae estExt_fgenesh2_pm.C_3240002 N 0.000
F443_19335 Phytophthora parasitica F443_19335 N 0.000
GH18160 Drosophila grimshawi FBgn0125628 I 0.000
GK13574 Drosophila willistoni FBgn0215582 I 0.000
GE25578 Drosophila yakuba FBgn0242642 I 0.000
fgenesh1_pg.C_scaffold_73784000001 Phytophthora capsici fgenesh1_pg.C_scaffold_73784000001 N 0.000
fgenesh1_pm.2_#_13 Coccomyxa subellipsoidea C169 fgenesh1_pm.2_#_13 N 0.000
fgeneshCV_pg.C_scaffold_2000022 Chlorella vulgaris fgeneshCV_pg.C_scaffold_2000022 N 0.000
fgenesh_scip_prom.28083.7036 Phytophthora lateralis fgenesh_scip_prom.28083.7036 N 0.000
fgenesh_scip_prom.46568.2049 Phytophthora kernoviae fgenesh_scip_prom.46568.2049 N 0.000
GB50764 Apis mellifera GB50764 I 0.000
GLYMA01G28820 Glycine max GLYMA01G28820 I 0.000
GLYMA03G08270 Glycine max GLYMA03G08270 I 0.000
GPUH_0000676401 Gongylonema pulchrum GPUH_0000676401 N 0.000
GRMZM5G834758 Zea mays GRMZM5G834758 I 0.000
GUITHDRAFT_162866 Guillardia theta GUITHDRAFT_162866 N 0.000
HCOI00594600 Haemonchus contortus HCOI00594600 N 0.000
HelroG66455 Helobdella robusta HelroG66455 N 0.000
HHAL005242-PA Halyomorpha halys HHAL005242-PA I 0.000
HMEL009197 Heliconius melpomene HMEL009197 N 0.000
HPBE_0001252601 Heligmosomoides bakeri HPBE_0001252601 N 0.000
HPLM_0000348901 Haemonchus placei HPLM_0000348901 N 0.000
Hsal_04778--XP_394373.1_APIME Harpegnathos saltator Hsal_04778--XP_394373.1_APIME I 0.000
ISCW011313 Ixodes scapularis ISCW011313 N 0.000
KGM_20190 Danaus plexippus KGM_20190 I 0.000
LCUP006380 Lucilia cuprina LCUP006380 N 0.000
maker-nMf.1.1.scaf18285-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf18285-snap-gene-0.4 N 0.000
maker-pir_contig_430-fgenesh-gene-0.3 Pythium irregulare maker-pir_contig_430-fgenesh-gene-0.3 N 0.000
maker-piw_contig_1911-snap-gene-0.6 Pythium iwayamai maker-piw_contig_1911-snap-gene-0.6 N 0.000
maker-pve_contig_105-snap-gene-0.29 Pythium vexans maker-pve_contig_105-snap-gene-0.29 N 0.000
MCINX012524 Melitaea cinxia MCINX012524 I 0.000
MDOA001488 Musca domestica MDOA001488 I 0.000
MhA1_Contig1250.frz3.gene10 Meloidogyne hapla MhA1_Contig1250.frz3.gene10 N 0.000
Minc12734 Meloidogyne incognita Minc12734 N 0.000
ML11467a Mnemiopsis leidyi ML11467a N 0.000
MTR_8g018100 Medicago truncatula MTR_8g018100 N 0.000
NBR_0000605501 Nippostrongylus brasiliensis NBR_0000605501 N 0.000
NECAME_12352 Necator americanus NECAME_12352 N 0.000
NEMVEDRAFT_v1g201358 Nematostella vectensis NEMVEDRAFT_v1g201358 I 0.000
NV13812 Nasonia vitripennis NV13812 I 0.000
Ocbimv22013575m.g Octopus bimaculoides Ocbimv22013575m.g I 0.000
OESDEN_05486 Oesophagostomum dentatum OESDEN_05486 N 0.000
PEQ_0000413701 Parascaris equorum PEQ_0000413701 N 0.000
PHUM036320 Pediculus humanus PHUM036320 N 0.000
Phyra74523 Phytophthora ramorum Phyra74523 N 0.000
Physo132366 Phytophthora sojae Physo132366 N 0.000
PYU1_G003004 Pythium ultimum PYU1_G003004 N 0.000
RPRC009760 Rhodnius prolixus RPRC009760 N 0.000
SBAD_0000307901 Soboliphyme baturini SBAD_0000307901 N 0.000
Si007288m.g Setaria italica Si007288m.g I 0.000
SINV12391 Solenopsis invicta SINV12391 I 0.000
Sjc_0011880 Schistosoma japonicum Sjc_0011880 N 0.000
Smp_004360 Schistosoma mansoni Smp_004360 N 0.000
SMRZ_0002114501 Schistosoma margrebowiei SMRZ_0002114501 N 0.000
SPRG_06372 Saprolegnia parasitica SPRG_06372 N 0.000
SPU_001776 Strongylocentrotus purpuratus SPU_001776 N 0.000
TC004658 Tribolium castaneum TC004658 N 0.000
TCLT_0001081001 Thelazia callipaeda TCLT_0001081001 N 0.000
TCM_018380 Theobroma cacao TCM_018380 I 0.000
TELCIR_11967 Teladorsagia circumcincta TELCIR_11967 N 0.000
tetur18g00680 Tetranychus urticae tetur18g00680 I 0.000
TRE_0001918901 Trichobilharzia regenti TRE_0001918901 N 0.000
TTRE_0000309701 Trichuris trichiura TTRE_0000309701 N 0.000
Y73E7A.1 Caenorhabditis elegans WBGene00022268 N 0.000