Cla020838 (Citrullus lanatus)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Cla020838 T296594_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANAC050
M07200_2.00 		Arabidopsis thaliana
CTTGHNNYNCAAGNA
TNCTTGNRNNDCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_colamp_a 		0.908 0.807
ANAC050
M07201_2.00 		Arabidopsis thaliana
CTTGNNNHRCAMGBHA
TDVCKTGYDNNNCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_col_v3a 		0.908 0.807
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla020838 NAC/NAM 31 157

Links

Other NAC/NAM family TFs
Other Citrullus lanatus TFs

77 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AALB005452 Anopheles albimanus AALB005452 I 0.000
ASU_10550 Ascaris suum ASU_10550 I 0.000
Bm10123 Brugia malayi Bm10123 I 0.000
BTMF_0000901301 Brugia timori BTMF_0000901301 I 0.000
CBG24578 Caenorhabditis briggsae CBG24578 D 0.000
CJA02489 Caenorhabditis japonica CJA02489 I 0.000
CRE18960 Caenorhabditis remanei CRE18960 I 0.000
DAPPUDRAFT_314795 Daphnia pulex DAPPUDRAFT_314795 I 0.000
GPLIN_000275800 Globodera pallida GPLIN_000275800 I 0.000
HMEL005588 Heliconius melpomene HMEL005588 I 0.000
KGM_17297 Danaus plexippus KGM_17297 I 0.000
nDi.2.2.2.g04955 Dirofilaria immitis nDi.2.2.2.g04955 I 0.000
nLs.2.1.2.g05683 Litomosoides sigmodontis nLs.2.1.2.g05683 I 0.000
SLOPH_443 Spraguea lophii SLOPH_443 I 0.000
TriadG9468 Trichoplax adhaerens TriadG9468 I 0.000
unc-62 Caenorhabditis elegans WBGene00006796 D 0.000
WBGene00242324 Onchocerca volvulus WBGene00242324 I 0.000
XP_002647234.1 Caenorhabditis briggsae XP_002647234.1 I 0.000