CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SLOPH_443
(
Spraguea lophii
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
SLOPH_443
T223347_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CBG24578
M02065_2.00
Caenorhabditis briggsae
NNNTGACAKSTN
NASMTGTCANNN
PBM
Weirauch et al.(2014)
pTH6524
0.618
0.509
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPR79977
Homeodomain
134
191
FKKRKNFSSQAVNKLKKWIIQNKKNPYPTNEKKLQLCLETGLEPKQINNWFINARRRL
Links
Other
Homeodomain
family TFs
Other
Spraguea lophii
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nAv.1.0.1.g05377
Acanthocheilonema viteae
nAv.1.0.1.g05377
I
0.666
nLs.2.1.2.g05683
Litomosoides sigmodontis
nLs.2.1.2.g05683
I
0.666
WBGene00242324
Onchocerca volvulus
WBGene00242324
I
0.658
nDi.2.2.2.g04955
Dirofilaria immitis
nDi.2.2.2.g04955
I
0.658
BTMF_0000901301
Brugia timori
BTMF_0000901301
I
0.658
Bm10123
Brugia malayi
Bm10123
I
0.658
CBG24578
Caenorhabditis briggsae
CBG24578
D
0.618
CJA02489
Caenorhabditis japonica
CJA02489
I
0.618
ASU_10550
Ascaris suum
ASU_10550
I
0.618
CRE18960
Caenorhabditis remanei
CRE18960
I
0.618
XP_002647234.1
Caenorhabditis briggsae
XP_002647234.1
I
0.618
unc-62
Caenorhabditis elegans
WBGene00006796
D
0.618
SSTP_0001175600
Strongyloides stercoralis
SSTP_0001175600
I
0.606
SVE_0999800
Strongyloides venezuelensis
SVE_0999800
I
0.606
PTRK_0001375800
Parastrongyloides trichosuri
PTRK_0001375800
I
0.606
SPAL_0001594500
Strongyloides papillosus
SPAL_0001594500
I
0.606
L893_g8903
Steinernema glaseri
L893_g8903
I
0.606
L892_g28686
Steinernema scapterisci
L892_g28686
I
0.606
L596_g16822
Steinernema carpocapsae
L596_g16822
I
0.606
CAOG_02804
Capsaspora owczarzaki
CAOG_02804
N
0.601