PTRK_0001375800 (Parastrongyloides trichosuri)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 PTRK_0001375800 T235749_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CBG24578
M02065_2.00 		Caenorhabditis briggsae
NNNTGACAKSTN
NASMTGTCANNN		 PBM
Weirauch et al.(2014)
pTH6524 		0.855 0.945
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PTRK_0001375800.1 Homeodomain 530 587

Links

Other Homeodomain family TFs
Other Parastrongyloides trichosuri TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
L596_g16822 Steinernema carpocapsae L596_g16822 I 0.867
L892_g28686 Steinernema scapterisci L892_g28686 I 0.867
L893_g8903 Steinernema glaseri L893_g8903 I 0.867
SPAL_0001594500 Strongyloides papillosus SPAL_0001594500 I 0.867
SSTP_0001175600 Strongyloides stercoralis SSTP_0001175600 I 0.867
SVE_0999800 Strongyloides venezuelensis SVE_0999800 I 0.867
CBG24578 Caenorhabditis briggsae CBG24578 D 0.855
CJA02489 Caenorhabditis japonica CJA02489 I 0.855
CRE18960 Caenorhabditis remanei CRE18960 I 0.855
XP_002647234.1 Caenorhabditis briggsae XP_002647234.1 I 0.855
ASU_10550 Ascaris suum ASU_10550 I 0.855
unc-62 Caenorhabditis elegans WBGene00006796 D 0.854
GPLIN_000275800 Globodera pallida GPLIN_000275800 I 0.695
fgenesh2_pg.scaffold_23000011 Monosiga brevicollis fgenesh2_pg.scaffold_23000011 I 0.646
SLOPH_443 Spraguea lophii SLOPH_443 I 0.606