CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.185760
(
Cucumis sativus
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Cucsa.185760
T296983_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.185760.1
NAC/NAM
18
150
LPGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEPFNLSRYSGERCRRDSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENRVIGVKKTMVFYRGKAPTGTKTKWKMNEYKA
Links
Other
NAC/NAM
family TFs
Other
Cucumis sativus
TFs
127 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30055.m001588
Ricinus communis
30055.m001588
N
0.889
Aquca_005_00168
Aquilegia coerulea
Aquca_005_00168
N
0.931
NAC090
Arabidopsis thaliana
AT5G22380
N
0.908
BGIOSGA004848
Oryza indica
BGIOSGA004848
N
0.914
BGIOSGA034823
Oryza indica
BGIOSGA034823
N
0.904
Bo2g023870
Brassica oleracea
Bo2g023870
N
0.894
Bo3g016870
Brassica oleracea
Bo3g016870
N
0.898
Bo9g148540
Brassica oleracea
Bo9g148540
N
0.894
Bostr.26527s0039
Boechera stricta
Bostr.26527s0039
N
0.891
Bra002408
Brassica rapa
Bra002408
N
0.895
Bra006624
Brassica rapa
Bra006624
N
0.895
Bra020188
Brassica rapa
Bra020188
N
0.894
BRADI2G55780
Brachypodium distachyon
BRADI2G55780
N
0.888
Cagra.0846s0014
Capsella grandiflora
Cagra.0846s0014
N
0.894
Carubv10001788m.g
Capsella rubella
Carubv10001788m.g
N
0.894
cassava13394.valid.m1
Manihot esculenta
cassava13394.valid.m1
N
0.968
cassava14235.m1
Manihot esculenta
cassava14235.m1
N
0.979
cassava15688.m1
Manihot esculenta
cassava15688.m1
N
0.965
cassava3989.m1
Manihot esculenta
cassava3989.m1
N
0.935
Ca_00818
Cicer arietinum
Ca_00818
N
0.881
Ca_15160
Cicer arietinum
Ca_15160
N
0.943
Ciclev10029032m.g
Citrus clementina
Ciclev10029032m.g
N
0.974
Cla003087
Citrullus lanatus
Cla003087
I
0.959
Cla008777
Citrullus lanatus
Cla008777
N
0.992
Cla018691
Citrullus lanatus
Cla018691
N
0.929
Cucsa.083530
Cucumis sativus
Cucsa.083530
N
0.923
Cucsa.319840
Cucumis sativus
Cucsa.319840
I
0.960
Eucgr.A02635
Eucalyptus grandis
Eucgr.A02635
N
0.947
Eucgr.A02636
Eucalyptus grandis
Eucgr.A02636
N
0.956
Eucgr.A02637
Eucalyptus grandis
Eucgr.A02637
N
0.938
Eucgr.A02638
Eucalyptus grandis
Eucgr.A02638
N
0.938
Eucgr.A02639
Eucalyptus grandis
Eucgr.A02639
N
0.957
Eucgr.C02446
Eucalyptus grandis
Eucgr.C02446
N
0.934
Eucgr.I00583
Eucalyptus grandis
Eucgr.I00583
N
0.922
Eucgr.I00587
Eucalyptus grandis
Eucgr.I00587
N
0.927
Eucgr.J00505
Eucalyptus grandis
Eucgr.J00505
N
0.929
Eucgr.J00508
Eucalyptus grandis
Eucgr.J00508
N
0.929
Eucgr.J00509
Eucalyptus grandis
Eucgr.J00509
N
0.894
Eucgr.J00511
Eucalyptus grandis
Eucgr.J00511
N
0.928
Eucgr.J00512
Eucalyptus grandis
Eucgr.J00512
N
0.934
Eucgr.J00513
Eucalyptus grandis
Eucgr.J00513
N
0.931
Eucgr.J00514
Eucalyptus grandis
Eucgr.J00514
N
0.938
Eucgr.J00516
Eucalyptus grandis
Eucgr.J00516
N
0.929
Eucgr.J00517
Eucalyptus grandis
Eucgr.J00517
N
0.964
Eucgr.J00518
Eucalyptus grandis
Eucgr.J00518
N
0.968
Eucgr.J00519
Eucalyptus grandis
Eucgr.J00519
N
0.962
Eucgr.J00520
Eucalyptus grandis
Eucgr.J00520
N
0.954
evm.TU.supercontig_104.98
Carica papaya
evm.TU.supercontig_104.98
N
0.939
evm.TU.supercontig_195.14
Carica papaya
evm.TU.supercontig_195.14
N
0.965
F775_19761
Aegilops tauschii
F775_19761
N
0.897
anac090
Arabidopsis lyrata
fgenesh2_kg.6__2228__AT5G22380.1
N
0.916
gene21734-v1.0-hybrid
Fragaria vesca
gene21734-v1.0-hybrid
N
0.926
GLYMA03G35570
Glycine max
GLYMA03G35570
N
0.927
GLYMA12G09670
Glycine max
GLYMA12G09670
N
0.944
GLYMA12G31150
Glycine max
GLYMA12G31150
N
0.961
GLYMA13G39160
Glycine max
GLYMA13G39160
N
0.961
GLYMA19G38211
Glycine max
GLYMA19G38211
N
0.938
Gorai.001G122800
Gossypium raimondii
Gorai.001G122800
N
0.969
Gorai.002G238300
Gossypium raimondii
Gorai.002G238300
N
0.927
Gorai.006G113000
Gossypium raimondii
Gorai.006G113000
N
0.928
GRMZM2G439903
Zea mays
GRMZM2G439903
N
0.935
GSMUA_Achr10G04720_001
Musa acuminata
GSMUA_Achr10G04720_001
N
0.948
GSMUA_Achr6G19400_001
Musa acuminata
GSMUA_Achr6G19400_001
N
0.937
GSMUA_Achr8G01410_001
Musa acuminata
GSMUA_Achr8G01410_001
N
0.895
GSMUA_Achr9G29750_001
Musa acuminata
GSMUA_Achr9G29750_001
N
0.922
LPERR01G32790
Leersia perrieri
LPERR01G32790
N
0.905
Lus10004846.g
Linum usitatissimum
Lus10004846.g
N
0.941
Lus10020643.g
Linum usitatissimum
Lus10020643.g
N
0.941
Lus10029410.g
Linum usitatissimum
Lus10029410.g
N
0.913
MDP0000130797
Malus domestica
MDP0000130797
N
0.958
MDP0000205938
Malus domestica
MDP0000205938
N
0.965
MDP0000759504
Malus domestica
MDP0000759504
N
0.958
mgf020234m
Mimulus guttatus
mgf020234m
N
0.935
mgf024293m
Mimulus guttatus
mgf024293m
N
0.888
MTR_2g086690
Medicago truncatula
MTR_2g086690
N
0.941
MTR_4g052620
Medicago truncatula
MTR_4g052620
N
0.962
MTR_7g105170
Medicago truncatula
MTR_7g105170
N
0.882
OB11G12830
Oryza brachyantha
OB11G12830
N
0.893
OBART01G38190
Oryza barthii
OBART01G38190
N
0.914
OBART11G03530
Oryza barthii
OBART11G03530
N
0.904
OGLUM01G42380
Oryza glumaepatula
OGLUM01G42380
N
0.914
OGLUM11G03170
Oryza glumaepatula
OGLUM11G03170
N
0.904
OMERI01G35090
Oryza meridionalis
OMERI01G35090
N
0.914
OMERI11G03230
Oryza meridionalis
OMERI11G03230
N
0.904
ONIVA01G42870
Oryza nivara
ONIVA01G42870
N
0.914
ONIVA11G03690
Oryza nivara
ONIVA11G03690
N
0.904
OPUNC01G36980
Oryza punctata
OPUNC01G36980
N
0.917
OPUNC11G03220
Oryza punctata
OPUNC11G03220
N
0.904
OPUNC12G03240
Oryza punctata
OPUNC12G03240
N
0.875
orange1.1g023996m.g
Citrus sinensis
orange1.1g023996m.g
N
0.974
ORGLA01G0320200
Oryza glaberrima
ORGLA01G0320200
N
0.914
ORGLA11G0032800
Oryza glaberrima
ORGLA11G0032800
N
0.904
ORGLA12G0180300
Oryza glaberrima
ORGLA12G0180300
N
0.904
ORUFI01G41540
Oryza rufipogon
ORUFI01G41540
N
0.914
ORUFI11G03420
Oryza rufipogon
ORUFI11G03420
N
0.904
OS01G0862800
Oryza sativa
OS01G0862800
N
0.914
OS11G0154500
Oryza sativa
OS11G0154500
N
0.904
Pavir.Bb01366
Panicum virgatum
Pavir.Bb01366
N
0.913
Pavir.Ea03745
Panicum virgatum
Pavir.Ea03745
N
0.916
Pavir.Ha01768
Panicum virgatum
Pavir.Ha01768
N
0.896
Pavir.Hb01808
Panicum virgatum
Pavir.Hb01808
N
0.898
Pavir.J02276
Panicum virgatum
Pavir.J02276
N
0.884
Pavir.J13106
Panicum virgatum
Pavir.J13106
N
0.890
PGSC0003DMG400026332
Solanum tuberosum
PGSC0003DMG400026332
N
0.961
PK27925.1
Cannabis sativa
PK27925.1
N
0.970
PK29014.1
Cannabis sativa
PK29014.1
N
0.963
Pm001403
Prunus mume
Pm001403
N
0.961
Pm001404
Prunus mume
Pm001404
N
0.895
POPTR_0009s02430
Populus trichocarpa
POPTR_0009s02430
N
0.949
POPTR_0016s07690
Populus trichocarpa
POPTR_0016s07690
N
0.899
PRUPE_ppa010337mg
Prunus persica
PRUPE_ppa010337mg
N
0.961
SapurV1A.0630s0010
Salix purpurea
SapurV1A.0630s0010
N
0.889
SapurV1A.0974s0010
Salix purpurea
SapurV1A.0974s0010
N
0.892
SapurV1A.3648s0010
Salix purpurea
SapurV1A.3648s0010
N
0.899
Sb05g003400
Sorghum bicolor
Sb05g003400
N
0.912
Si002586m.g
Setaria italica
Si002586m.g
N
0.925
Si025833m.g
Setaria italica
Si025833m.g
N
0.907
Si026707m.g
Setaria italica
Si026707m.g
N
0.922
Solyc09g010160.1
Solanum lycopersicum
Solyc09g010160.1
N
0.937
Solyc11g068620.1
Solanum lycopersicum
Solyc11g068620.1
N
0.959
TCM_022676
Theobroma cacao
TCM_022676
N
0.887
TCM_041364
Theobroma cacao
TCM_041364
N
0.960
Thhalv10014563m.g
Eutrema salsugineum
Thhalv10014563m.g
N
0.894
TRAES3BF019300010CFD_g
Triticum aestivum
TRAES3BF019300010CFD_g
N
0.907
TRIUR3_34272
Triticum urartu
TRIUR3_34272
N
0.885
VIT_06s0080g00780
Vitis vinifera
VIT_06s0080g00780
N
0.879
VIT_18s0041g00700
Vitis vinifera
VIT_18s0041g00700
N
0.893