Bostr.20129s0079 (Boechera stricta)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Bostr.20129s0079 T297265_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC031
M07182_2.00 		Arabidopsis thaliana
NTWDCKTGTNNHWYACGY
RCGTRWDNNACAMGHWAN		 Dap-seq
OMalley et al.(2016)
CUC3_col_a 		0.961 0.955
NAC031
M07183_2.00 		Arabidopsis thaliana
CKTGTNNHDCACGYHA
TDRCGTGHDNNACAMG		 Dap-seq
OMalley et al.(2016)
CUC3_colamp_a 		0.961 0.955
NAC098
M07239_2.00 		Arabidopsis thaliana
CKTGTNNNDYAMGYHA
TDRCKTRHNNNACAMG		 Dap-seq
OMalley et al.(2016)
CUC2_colamp_a 		0.906 0.732
NAC098
M07240_2.00 		Arabidopsis thaliana
NNNTWNCKTGHNNHWCAMG
CKTGWDNNDCAMGNWANNN		 Dap-seq
OMalley et al.(2016)
CUC2_col 		0.906 0.732
NAC59
M11080_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ANAC059_01 		0.886 0.714
NAC100
M02375_2.00 		Arabidopsis thaliana
NBAMKNHWNN
NNWDNMKTVN		 PBM
Weirauch et al.(2014)
pTH7239 		0.882 0.732
ANAC100
M02377_2.00 		Arabidopsis lyrata
DYACGYHANN
NNTDRCGTRH		 PBM
Weirauch et al.(2014)
pTH9234 		0.878 0.732
NAC92
M00979_2.00 		Arabidopsis thaliana
NNDYACGBHA
TDVCGTRHNN		 PBM
Lindemose et al.(2014)
ANAC092 		0.874 0.723
NAC92
M00730_2.00 		Arabidopsis thaliana
DYACGNHAN
NTDNCGTRH		 PBM
Chang et al.(2013)
pTH7335 		0.874 0.723
NAC92
M07234_2.00 		Arabidopsis thaliana
TWNCKTGHNNHDCAMGYWAY
RTWRCKTGHDNNDCAMGNWA		 Dap-seq
OMalley et al.(2016)
ANAC092_colamp_a 		0.874 0.723
NAC92
M07235_2.00 		Arabidopsis thaliana
WRCKTGTNNNDCAMG
CKTGHNNNACAMGYW		 Dap-seq
OMalley et al.(2016)
ANAC092_col_v3a 		0.874 0.723
ANAC080
M02376_2.00 		Arabidopsis lyrata
NBAMKNHWNN
NNWDNMKTVN		 PBM
Weirauch et al.(2014)
pTH9230 		0.871 0.723
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.20129s0079.1.p NAC/NAM 23 149

Links

Other NAC/NAM family TFs
Other Boechera stricta TFs

212 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29974.m000242 Ricinus communis 29974.m000242 I
AMTR_s00079p00137860 Amborella trichopoda AMTR_s00079p00137860 I
Aquca_041_00009 Aquilegia coerulea Aquca_041_00009 I
BEE1 Arabidopsis thaliana AT1G18400 N
BHLH75 Arabidopsis thaliana AT1G25330 I
BEE3 Arabidopsis thaliana AT1G73830 N
Bo2g080780 Brassica oleracea Bo2g080780 N
Bo5g025360 Brassica oleracea Bo5g025360 N
Bo6g118140 Brassica oleracea Bo6g118140 N
Bostr.3288s0027 Boechera stricta Bostr.3288s0027 N
Bostr.7128s0442 Boechera stricta Bostr.7128s0442 N
Bra008113 Brassica rapa Bra008113 N
Bra015960 Brassica rapa Bra015960 N
Bra025910 Brassica rapa Bra025910 N
Cagra.0876s0016 Capsella grandiflora Cagra.0876s0016 N
Cagra.0909s0019 Capsella grandiflora Cagra.0909s0019 N
Carubv10009894m.g Capsella rubella Carubv10009894m.g N
Carubv10020802m.g Capsella rubella Carubv10020802m.g N
cassava32072.m1 Manihot esculenta cassava32072.m1 N
Ca_13025 Cicer arietinum Ca_13025 I
chr4.CM0042.750.nc Lotus japonicus chr4.CM0042.750.nc N
Cla018783 Citrullus lanatus Cla018783 I
Cla019256 Citrullus lanatus Cla019256 I
Cucsa.111110 Cucumis sativus Cucsa.111110 I
Eucgr.B00731 Eucalyptus grandis Eucgr.B00731 I
Eucgr.H00748 Eucalyptus grandis Eucgr.H00748 I
Eucgr.K02229 Eucalyptus grandis Eucgr.K02229 I
evm.TU.supercontig_3.503 Carica papaya evm.TU.supercontig_3.503 N
fgenesh1_pm.C_scaffold_1001571 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001571 N
BEE3 Arabidopsis lyrata fgenesh2_kg.2__1650__AT1G73830.1 N
gene25151-v1.0-hybrid Fragaria vesca gene25151-v1.0-hybrid I
GLYMA05G35060 Glycine max GLYMA05G35060 N
GLYMA07G10311 Glycine max GLYMA07G10311 I
GLYMA08G04661 Glycine max GLYMA08G04661 N
GLYMA09G31580 Glycine max GLYMA09G31580 I
Gorai.001G074900 Gossypium raimondii Gorai.001G074900 I
Gorai.006G060400 Gossypium raimondii Gorai.006G060400 I
Gorai.006G194500 Gossypium raimondii Gorai.006G194500 I
Gorai.007G005700 Gossypium raimondii Gorai.007G005700 I
GSMUA_Achr1G21010_001 Musa acuminata GSMUA_Achr1G21010_001 I
GSMUA_Achr4G16120_001 Musa acuminata GSMUA_Achr4G16120_001 I
GSMUA_Achr5G23700_001 Musa acuminata GSMUA_Achr5G23700_001 I
GSMUA_Achr9G00560_001 Musa acuminata GSMUA_Achr9G00560_001 I
Lus10009034.g Linum usitatissimum Lus10009034.g I
Lus10009673.g Linum usitatissimum Lus10009673.g I
MDP0000779358 Malus domestica MDP0000779358 N
MDP0000879337 Malus domestica MDP0000879337 I
mgf013353m Mimulus guttatus mgf013353m I
mgf017044m Mimulus guttatus mgf017044m I
MTR_6g084120 Medicago truncatula MTR_6g084120 N
PGSC0003DMG400005388 Solanum tuberosum PGSC0003DMG400005388 I
PGSC0003DMG400005725 Solanum tuberosum PGSC0003DMG400005725 N
Pm025178 Prunus mume Pm025178 I
POPTR_0012s05210 Populus trichocarpa POPTR_0012s05210 I
POPTR_0015s03760 Populus trichocarpa POPTR_0015s03760 I
PRUPE_ppa015301mg Prunus persica PRUPE_ppa015301mg I
SapurV1A.0530s0010 Salix purpurea SapurV1A.0530s0010 I
SapurV1A.0719s0010 Salix purpurea SapurV1A.0719s0010 I
SapurV1A.1621s0020 Salix purpurea SapurV1A.1621s0020 I
Solyc03g119390.2 Solanum lycopersicum Solyc03g119390.2 N
Solyc12g036470.1 Solanum lycopersicum Solyc12g036470.1 I
TCM_012362 Theobroma cacao TCM_012362 I
Thhalv10008517m.g Eutrema salsugineum Thhalv10008517m.g N
Thhalv10019010m.g Eutrema salsugineum Thhalv10019010m.g N
VIT_17s0000g03580 Vitis vinifera VIT_17s0000g03580 I