Cagra.0909s0019 (Capsella grandiflora)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Cagra.0909s0019 T049225_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0909s0019.1.p bHLH 157 207

Links

Other bHLH family TFs
Other Capsella grandiflora TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BEE1 Arabidopsis thaliana AT1G18400 N 0.914
Bo2g080780 Brassica oleracea Bo2g080780 N 0.914
Bo6g118140 Brassica oleracea Bo6g118140 N 0.914
Bra008113 Brassica rapa Bra008113 N 0.914
Bra015960 Brassica rapa Bra015960 N 0.914
fgenesh1_pm.C_scaffold_1001571 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001571 N 0.914
Bostr.7128s0442 Boechera stricta Bostr.7128s0442 N 0.914
Carubv10009894m.g Capsella rubella Carubv10009894m.g N 0.914
Thhalv10019010m.g Eutrema salsugineum Thhalv10019010m.g N 0.914
BEE3 Arabidopsis thaliana AT1G73830 N 0.902
Bo5g025360 Brassica oleracea Bo5g025360 N 0.902
Bra025910 Brassica rapa Bra025910 N 0.902
BEE3 Arabidopsis lyrata fgenesh2_kg.2__1650__AT1G73830.1 N 0.902
Bostr.3288s0027 Boechera stricta Bostr.3288s0027 N 0.902
Cagra.0876s0016 Capsella grandiflora Cagra.0876s0016 N 0.902
Carubv10020802m.g Capsella rubella Carubv10020802m.g N 0.902
Thhalv10008517m.g Eutrema salsugineum Thhalv10008517m.g N 0.902
PGSC0003DMG400005388 Solanum tuberosum PGSC0003DMG400005388 I 0.875
PGSC0003DMG400005725 Solanum tuberosum PGSC0003DMG400005725 N 0.875
POPTR_0012s05210 Populus trichocarpa POPTR_0012s05210 I 0.875
POPTR_0015s03760 Populus trichocarpa POPTR_0015s03760 I 0.875
PRUPE_ppa015301mg Prunus persica PRUPE_ppa015301mg I 0.875
Solyc03g119390.2 Solanum lycopersicum Solyc03g119390.2 N 0.875
Solyc12g036470.1 Solanum lycopersicum Solyc12g036470.1 I 0.875
TCM_012362 Theobroma cacao TCM_012362 I 0.875
VIT_17s0000g03580 Vitis vinifera VIT_17s0000g03580 I 0.875
Cla018783 Citrullus lanatus Cla018783 I 0.875
Cla019256 Citrullus lanatus Cla019256 I 0.875
Pm025178 Prunus mume Pm025178 I 0.875
29974.m000242 Ricinus communis 29974.m000242 I 0.875
Cucsa.111110 Cucumis sativus Cucsa.111110 I 0.875
mgf013353m Mimulus guttatus mgf013353m I 0.875
Eucgr.B00731 Eucalyptus grandis Eucgr.B00731 I 0.875
evm.TU.supercontig_3.503 Carica papaya evm.TU.supercontig_3.503 N 0.875
Gorai.001G074900 Gossypium raimondii Gorai.001G074900 I 0.875
Gorai.006G060400 Gossypium raimondii Gorai.006G060400 I 0.875
Gorai.006G194500 Gossypium raimondii Gorai.006G194500 I 0.875
Gorai.007G005700 Gossypium raimondii Gorai.007G005700 I 0.875
MDP0000879337 Malus domestica MDP0000879337 I 0.875
SapurV1A.0530s0010 Salix purpurea SapurV1A.0530s0010 I 0.875
SapurV1A.0719s0010 Salix purpurea SapurV1A.0719s0010 I 0.875
SapurV1A.1621s0020 Salix purpurea SapurV1A.1621s0020 I 0.875
GLYMA05G35060 Glycine max GLYMA05G35060 N 0.872
GLYMA07G10311 Glycine max GLYMA07G10311 I 0.872
GLYMA08G04661 Glycine max GLYMA08G04661 N 0.872
GLYMA09G31580 Glycine max GLYMA09G31580 I 0.872
Ca_13025 Cicer arietinum Ca_13025 I 0.872
Lus10009034.g Linum usitatissimum Lus10009034.g I 0.872
Lus10009673.g Linum usitatissimum Lus10009673.g I 0.872
chr4.CM0042.750.nc Lotus japonicus chr4.CM0042.750.nc N 0.872
gene25151-v1.0-hybrid Fragaria vesca gene25151-v1.0-hybrid I 0.863
cassava32072.m1 Manihot esculenta cassava32072.m1 N 0.860
GSMUA_Achr5G23700_001 Musa acuminata GSMUA_Achr5G23700_001 I 0.852
mgf017044m Mimulus guttatus mgf017044m I 0.851
Eucgr.K02229 Eucalyptus grandis Eucgr.K02229 I 0.851
MTR_6g084120 Medicago truncatula MTR_6g084120 N 0.848
Aquca_041_00009 Aquilegia coerulea Aquca_041_00009 I 0.848
MDP0000779358 Malus domestica MDP0000779358 N 0.847
BHLH75 Arabidopsis thaliana AT1G25330 I 0.842
AMTR_s00079p00137860 Amborella trichopoda AMTR_s00079p00137860 I 0.839
GSMUA_Achr1G21010_001 Musa acuminata GSMUA_Achr1G21010_001 I 0.839
GSMUA_Achr4G16120_001 Musa acuminata GSMUA_Achr4G16120_001 I 0.839
GSMUA_Achr9G00560_001 Musa acuminata GSMUA_Achr9G00560_001 I 0.839
Eucgr.H00748 Eucalyptus grandis Eucgr.H00748 I 0.839