Cagra.0248s0087 (Capsella grandiflora)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Cagra.0248s0087 T297349_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
anac103
M07243_2.00 		Arabidopsis thaliana
TDVCTTGNDNHNCAAGTTWYY
RRWAACTTGNDNHNCAAGBHA		 Dap-seq
OMalley et al.(2016)
ANAC103_col_a 		0.955 0.893
anac103
M07244_2.00 		Arabidopsis thaliana
TTGNDNHNCAAGYTWY
RWARCTTGNDNHNCAA		 Dap-seq
OMalley et al.(2016)
ANAC103_colamp_a 		0.955 0.893
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0248s0087.1.p NAC/NAM 7 133

Links

Other NAC/NAM family TFs
Other Capsella grandiflora TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Eb00686 Panicum virgatum Pavir.Eb00686 N
Sb02g003755 Sorghum bicolor Sb02g003755 N
Sb03g000360 Sorghum bicolor Sb03g000360 N
Sb03g016811 Sorghum bicolor Sb03g016811 N
Sb04g009105 Sorghum bicolor Sb04g009105 N
Sb04g038210 Sorghum bicolor Sb04g038210 N
Sb07g014640 Sorghum bicolor Sb07g014640 N
Sb07g020933 Sorghum bicolor Sb07g020933 N
Sb08g005928 Sorghum bicolor Sb08g005928 N
Sb09g015393 Sorghum bicolor Sb09g015393 N