CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb08g005928
(
Sorghum bicolor
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
Sb08g005928
T027618_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb08g005928.1
BED ZF
39
89
DPAWKHCTMPDVNKKNSLKCNYCNNIYNGGITRIKYHLGKVPGFGVAKCNK
Links
Other
BED ZF
family TFs
Other
Sorghum bicolor
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sb02g003755
Sorghum bicolor
Sb02g003755
N
1.000
Sb04g038210
Sorghum bicolor
Sb04g038210
N
1.000
Sb03g016811
Sorghum bicolor
Sb03g016811
N
0.939
Sb10g012510
Sorghum bicolor
Sb10g012510
N
0.905
Sb04g010193
Sorghum bicolor
Sb04g010193
N
0.879
Sb07g020933
Sorghum bicolor
Sb07g020933
N
0.857
Sb05g011000
Sorghum bicolor
Sb05g011000
N
0.833
Sb02g023665
Sorghum bicolor
Sb02g023665
N
0.786
Sb09g022080
Sorghum bicolor
Sb09g022080
N
0.786
Pavir.J18772
Panicum virgatum
Pavir.J18772
N
0.786
Sb03g000360
Sorghum bicolor
Sb03g000360
N
0.762
Pavir.Eb00686
Panicum virgatum
Pavir.Eb00686
N
0.727
Traes_6BL_1B70F652A
Triticum aestivum
Traes_6BL_1B70F652A
N
0.711