CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Eb00686
(
Panicum virgatum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Pavir.Eb00686
T028466_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Eb00686.1.p
BED ZF
1
42
MPDVNKKQYLKSNYCDKIYHGGITRIKYHLGKVPKCGVAKCG
Links
Other
BED ZF
family TFs
Other
Panicum virgatum
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sb03g016811
Sorghum bicolor
Sb03g016811
N
0.788
Sb04g010193
Sorghum bicolor
Sb04g010193
N
0.788
Sb02g003755
Sorghum bicolor
Sb02g003755
N
0.727
Sb04g009105
Sorghum bicolor
Sb04g009105
N
0.727
Sb04g038210
Sorghum bicolor
Sb04g038210
N
0.727
Sb07g014640
Sorghum bicolor
Sb07g014640
N
0.727
Sb08g005928
Sorghum bicolor
Sb08g005928
N
0.727
Sb09g015393
Sorghum bicolor
Sb09g015393
N
0.727